RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 CLEC7AQ9BXN2 247 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 BEX2Q9BXY8 128 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 TMEM133Q9H2Q1 129 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 NARFLQ9H6Q4 476 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 BEX1Q9HBH7 125 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 RAB18Q9NP72 206 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 CCL28Q9NRJ3 127 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 COMMD9Q9P000 198 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 PSG11Q9UQ72 335 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 POLR3KQ9Y2Y1 108 aaPredicted RBP8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 DOCK11Q5JSL3 2073 aa8.36□□□□□ -1.07
FOXCUT-201ENST00000628509 MYO18BQ8IUG5 2567 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DSCAML1Q8TD84 2053 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 A0A1B0GW55 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 VWC2LB2RUY7 222 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 PGLYRP1O75594 196 aaPredicted RBP8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 APOA2P02652 100 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 LGALS4P56470 323 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 ZNF273Q14593 569 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 RTL8BQ17RB0 113 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 PRAMEF5Q5TYX0 476 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DHRS7BQ6IAN0 325 aaPredicted RBP8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 CCDC144NLQ6NUI1 221 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 ZNF818PQ6ZRF7 136 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 SLC25A48Q6ZT89 311 aaKnown RBP8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 CADM3Q8N126 398 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 LYG1Q8N1E2 194 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 ABHD12Q8N2K0 398 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 BEND2Q8NDZ0 799 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 SEC22CQ9BRL7 303 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 LPAR2Q9HBW0 351 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 MGAT4CQ9UBM8 478 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 DUX4Q9UBX2 424 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
FOXCUT-201ENST00000628509 TRAV20A0A0B4J274 112 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 OOSP1A8MZH6 123 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 J3QR06 171 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 VSIG10L2P0DP72 767 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 CCL3L1P16619 93 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 HLA-GP17693 338 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 PI3P19957 117 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 C4BPBP20851 252 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 OMGP23515 440 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 PRTN3P24158 256 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 COL8A1P27658 744 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 MC5RP33032 325 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 RAB13P51153 203 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 RAP2BP61225 183 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 ERVK-16P61578 105 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 SLC9A3R2Q15599 337 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 FAM219AQ8IW50 185 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 DRAM1Q8N682 238 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 LRTM2Q8N967 370 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 ADAD2Q8NCV1 583 aaKnown RBP8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 TCTEX1D2Q8WW35 142 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 CAPSLQ8WWF8 208 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 RRNAD1Q96FB5 475 aaKnown RBP8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 TMEM222Q9H0R3 208 aa8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 RANBP3Q9H6Z4 567 aaPredicted RBP8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 UNKLQ9H9P5 680 aaKnown RBP8.34□□□□□ -1.07
FOXCUT-201ENST00000628509 CFAP46Q8IYW2 2715 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 IGKV1D-13A0A0B4J2D9 117 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 C5orf51A6NDU8 294 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 M0R1X1 148 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 RBFOX2O43251 390 aaKnown RBP eCLIP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 TOX4O94842 621 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 LY86O95711 162 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 RLN2P04090 185 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 HNRNPCP07910 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 GIPP09681 153 aaPredicted RBP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 SULT1A3P0DMM9 295 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 SULT1A4P0DMN0 295 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 IGKV1-13P0DP09 117 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 VDAC1P21796 283 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 UCP1P25874 307 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 GZMKP49863 264 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 SMCPP49901 116 aaPredicted RBP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 GNG10P50151 68 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 DVL1P1P54792 670 aaPredicted RBP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 LMO4P61968 165 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 LOXL1Q08397 574 aaPredicted RBP8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 GNMTQ14749 295 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 MINOS1Q5TGZ0 78 aa8.33□□□□□ -1.08
FOXCUT-201ENST00000628509 TCF23Q7RTU1 214 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms