RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 PITPNAQ00169 270 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 LSAMPQ13449 338 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 EBI3Q14213 229 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 RPL39P5Q59GN2 51 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ZNF833PQ6ZTB9 187 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ODF3L1Q8IXM7 274 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 C5orf56Q8N8D9 126 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR13F1Q8NGS4 319 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ABHD14BQ96IU4 210 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ST6GALNAC5Q9BVH7 336 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 MRPS26Q9BYN8 205 aaKnown RBP11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 C11orf54Q9H0W9 315 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 GHITMQ9H3K2 345 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 DIABLOQ9NR28 239 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 RDH8Q9NYR8 311 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ZNF221Q9UK13 617 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 ELF5Q9UKW6 265 aaPredicted RBP11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 SPATA2Q9UM82 520 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
PCDHGC3-208ENST00000622836 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 ITGB1BP1O14713 200 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 DTYMKP23919 212 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 GPR12P47775 334 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 VBP1P61758 197 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 NCS1P62166 190 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 HIST2H2BDQ6DRA6 164 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 NUDCD2Q8WVJ2 157 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 NABP2Q9BQ15 211 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 RNF150Q9ULK6 438 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
PCDHGC3-208ENST00000622836 CSF1P09603 554 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 CD28P10747 220 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 MMDQ15546 238 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 PNLIPRP3Q17RR3 467 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 ZNF260Q3ZCT1 412 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 Q8N6K4 173 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR5AU1Q8NGC0 362 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR8H1Q8NGG4 311 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 RBMXL1Q96E39 390 aaKnown RBP11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 ZNF251Q9BRH9 671 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 CABLES2Q9BTV7 478 aa11.1□□□□□ -0.63
PCDHGC3-208ENST00000622836 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 A6NJ64 397 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 H7C2Y5 167 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 ACTBP60709 375 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 SRSF7Q16629 238 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 NSUN5P1Q3KNT7 163 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 UBE2NLQ5JXB2 153 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 GPR107Q5VW38 600 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR8U1Q8NH10 309 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 SLC25A46Q96AG3 418 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 S100A16Q96FQ6 103 aaKnown RBP11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 OR2D2Q9H210 308 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 DCSTAMPQ9H295 470 aa11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 LIN7CQ9NUP9 197 aaKnown RBP11.09□□□□□ -0.63
PCDHGC3-208ENST00000622836 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.63
PCDHGC3-208ENST00000622836 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 DIRAS3O95661 229 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 F2RL1P55085 397 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 GLDNQ6ZMI3 551 aaPredicted RBP11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 Q6ZS49 121 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 Q8N9W7 124 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 DRAXINQ8NBI3 349 aaPredicted RBP11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 MMP27Q9H306 513 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 KIAA1456Q9P272 454 aa11.08□□□□□ -0.64
PCDHGC3-208ENST00000622836 IGKV1D-8A0A087WSZ0 117 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 A0A1W2PRX2 142 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 PSMB11A5LHX3 300 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 M0R1X1 148 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 TSPAN15O95858 294 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 TFAP2AP05549 437 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 CTXN2P0C2S0 81 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 CT45A6P0DMU7 189 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 CT45A5P0DMU8 189 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 CT45A7P0DMV0 189 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms