RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 THADAQ6YHU6 1953 aa2.4□□□□□ -2.03
CPNE3-213ENST00000622183 MRC2Q9UBG0 1479 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 EFCAB10A6NFE3 127 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 STX10O60499 249 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 HPGDSO60760 199 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 ARL6IP5O75915 188 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 CDS2O95674 445 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 SERPINA6P08185 405 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 GABRA3P34903 492 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 PSMB3P49720 205 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 CLDN12P56749 244 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 RAB4BP61018 213 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 MAPK14Q16539 360 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 HLA-DRB5Q30154 266 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 CCDC58Q4VC31 144 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 TRMT12Q53H54 448 aaKnown RBP2.39□□□□□ -2.03
CPNE3-213ENST00000622183 BRD3OSQ6XYD6 125 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
CPNE3-213ENST00000622183 DCXRQ7Z4W1 244 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 OR51H1Q8NH63 302 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 CD200R1Q8TD46 325 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 DNAJB3Q8WWF6 145 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 CCDC42Q96M95 316 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 DHRS9Q9BPW9 319 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 DRC3Q9H069 523 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 NKIRAS1Q9NYS0 192 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 LINC00527Q9UJ94 153 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 ERGIC3Q9Y282 383 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 OR51B4Q9Y5P0 310 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 ERCC6Q03468 1493 aa2.39□□□□□ -2.03
CPNE3-213ENST00000622183 NISCHQ9Y2I1 1504 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 VIRMAQ69YN4 1812 aaKnown RBP2.38□□□□□ -2.03
CPNE3-213ENST00000622183 SHROOM3Q8TF72 1996 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 METTL15A6NJ78 407 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 K7EQS6 105 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 SLC25A20O43772 301 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 OR12D1P0DN82 309 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 LGALS3P17931 250 aaKnown RBP2.38□□□□□ -2.03
CPNE3-213ENST00000622183 ALDH3A1P30838 453 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 ITGB3BPQ13352 177 aaPredicted RBP2.38□□□□□ -2.03
CPNE3-213ENST00000622183 PDGFRLQ15198 375 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 CLVS2Q5SYC1 327 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 SPATA31B1PQ5VZV4 182 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 DNM1P34Q6PK57 102 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 SCGB1D4Q6XE38 83 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 Q6ZRU5 148 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 GID4Q8IVV7 300 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 RIBC1Q8N443 379 aaPredicted RBP2.38□□□□□ -2.03
CPNE3-213ENST00000622183 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 PPCDCQ96CD2 204 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 SPANXB1Q9NS25 103 aaPredicted RBP2.38□□□□□ -2.03
CPNE3-213ENST00000622183 WASHC3Q9Y3C0 194 aa2.38□□□□□ -2.03
CPNE3-213ENST00000622183 KDM5BQ9UGL1 1544 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 NUP160Q12769 1436 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 EEA1Q15075 1411 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 ADGRL3Q9HAR2 1447 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 IGLV10-54A0A075B6I4 117 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 A0A0A6YYH2 397 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 A6NJ64 397 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 GOLGA8KD6RF30 607 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 APOEP02649 317 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 CTXN2P0C2S0 81 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 CD99P14209 185 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
CPNE3-213ENST00000622183 CRABP1P29762 137 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 DAD1P61803 113 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 GLO1Q04760 184 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 TSPAN31Q12999 210 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 HCP5Q6MZN7 132 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 CCDC121Q6ZUS5 278 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 SCXQ7RTU7 201 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 ZFAND2AQ8N6M9 145 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 RMND5BQ96G75 393 aaPredicted RBP2.37□□□□□ -2.03
CPNE3-213ENST00000622183 OR8B2Q96RD0 313 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 FAM107BQ9H098 131 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 PLEKHJ1Q9NW61 149 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 VPREB3Q9UKI3 123 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 FAM32AQ9Y421 112 aaKnown RBP2.37□□□□□ -2.03
CPNE3-213ENST00000622183 SNX10Q9Y5X0 201 aa2.37□□□□□ -2.03
CPNE3-213ENST00000622183 CCDC144AA2RUR9 1427 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 ERBINQ96RT1 1412 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 FUOMA2VDF0 154 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 PGRMC1O00264 195 aaKnown RBP2.36□□□□□ -2.03
CPNE3-213ENST00000622183 COCHO43405 550 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 DEXIO95424 95 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 ORM2P19652 201 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 SPCS3P61009 180 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 DEFA6Q01524 100 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 BSPH1Q075Z2 132 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 MGAT3Q09327 533 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 SMAGPQ0VAQ4 97 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 MED21Q13503 144 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 PDK2Q15119 407 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 CST6Q15828 149 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 NOXRED1Q6NXP6 359 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 FAM151BQ6UXP7 276 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 TAC4Q86UU9 113 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 TBC1D19Q8N5T2 526 aa2.36□□□□□ -2.03
CPNE3-213ENST00000622183 TMEM251Q8N6I4 163 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms