RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 PIPOXQ9P0Z9 390 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 NKX1-2Q9UD57 310 aaPredicted RBP17.17■□□□□ 0.34
SRRT-218ENST00000620394 STEAP1Q9UHE8 339 aa17.17■□□□□ 0.34
SRRT-218ENST00000620394 FOXI3A8MTJ6 420 aaPredicted RBP17.16■□□□□ 0.34
SRRT-218ENST00000620394 ITGB1BP1O14713 200 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 IGLV1-40P01703 118 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 BLVRBP30043 206 aaPredicted RBP17.16■□□□□ 0.34
SRRT-218ENST00000620394 RAB25P57735 213 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 KIAA0141Q14154 515 aaPredicted RBP17.16■□□□□ 0.34
SRRT-218ENST00000620394 C9orf66Q5T8R8 295 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 TMEM91Q6ZNR0 172 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 FAM89BQ8N5H3 189 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 IL1F10Q8WWZ1 152 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 ANKRD60Q9BZ19 345 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 RIMS4Q9H426 269 aaPredicted RBP17.16■□□□□ 0.34
SRRT-218ENST00000620394 ISYNA1Q9NPH2 558 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 SLC23A1Q9UHI7 598 aa17.16■□□□□ 0.34
SRRT-218ENST00000620394 SLC17A2O00624 439 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 ST8SIA5O15466 376 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 CRIP2P52943 208 aaPredicted RBP17.15■□□□□ 0.34
SRRT-218ENST00000620394 RUNX1Q01196 453 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 NRG4Q8WWG1 115 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 UBE2E2Q96LR5 201 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 ASCL2Q99929 193 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 PLEKHJ1Q9NW61 149 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 TPRKBQ9Y3C4 175 aa17.15■□□□□ 0.34
SRRT-218ENST00000620394 DYNC2H1Q8NCM8 4307 aaKnown RBP17.15■□□□□ 0.34
SRRT-218ENST00000620394 OR5H14A6NHG9 310 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 ANKRD65E5RJM6 399 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 G3V318 75 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 RAB29O14966 203 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 PSMA1P25786 263 aaKnown RBP17.14■□□□□ 0.33
SRRT-218ENST00000620394 TRAM1Q15629 374 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 C19orf54Q5BKX5 351 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 FAM131AQ6UXB0 335 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 TMEM203Q969S6 136 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 AGMATQ9BSE5 352 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 URM1Q9BTM9 101 aaKnown RBP17.14■□□□□ 0.33
SRRT-218ENST00000620394 PARP12Q9H0J9 701 aaKnown RBP17.14■□□□□ 0.33
SRRT-218ENST00000620394 KLK15Q9H2R5 256 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 CHMP1AQ9HD42 196 aaPredicted RBP17.14■□□□□ 0.33
SRRT-218ENST00000620394 PARP11Q9NR21 331 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 HSF4Q9ULV5 492 aa17.14■□□□□ 0.33
SRRT-218ENST00000620394 I3L521 148 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 ARSBP15848 533 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 ECI1P42126 302 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 RPS25P62851 125 aaKnown RBP17.13■□□□□ 0.33
SRRT-218ENST00000620394 HLA-DRB3P79483 266 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 NDPQ00604 133 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 MLLT11Q13015 90 aaPredicted RBP17.13■□□□□ 0.33
SRRT-218ENST00000620394 ZNF491Q8N8L2 437 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 MINDY2Q8NBR6 621 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 GHITMQ9H3K2 345 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 KIAA1456Q9P272 454 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 AK3Q9UIJ7 227 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 MGAT4AQ9UM21 535 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 WSB1Q9Y6I7 421 aa17.13■□□□□ 0.33
SRRT-218ENST00000620394 BIRC6Q9NR09 4857 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 TRAV41A0A0B4J266 112 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 SOCS1O15524 211 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 ARL6IP5O75915 188 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 CT45A6P0DMU7 189 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 CT45A5P0DMU8 189 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 CT45A7P0DMV0 189 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 CPEP16870 476 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 P2RY14Q15391 338 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 RPL39P5Q59GN2 51 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 ASPHD1Q5U4P2 390 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 LIN54Q6MZP7 749 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 OR11H1Q8NG94 326 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 HDHD3Q9BSH5 251 aaPredicted RBP17.12■□□□□ 0.33
SRRT-218ENST00000620394 GNB4Q9HAV0 340 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 PLGRKTQ9HBL7 147 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 C12orf4Q9NQ89 552 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 VSIG4Q9Y279 399 aa17.12■□□□□ 0.33
SRRT-218ENST00000620394 TENM2Q9NT68 2774 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 SEC14L6B5MCN3 397 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 H0YJW9 148 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 RGS10O43665 173 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 RBBP9O75884 186 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 OR5AN1Q8NGI8 311 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 SETD6Q8TBK2 473 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 EDARADDQ8WWZ3 215 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 OR1A1Q9P1Q5 309 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 SCOCQ9UIL1 159 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 ZNF256Q9Y2P7 627 aaPredicted RBP17.11■□□□□ 0.33
SRRT-218ENST00000620394 AK6Q9Y3D8 172 aaKnown RBP17.11■□□□□ 0.33
SRRT-218ENST00000620394 FBXO7Q9Y3I1 522 aa17.11■□□□□ 0.33
SRRT-218ENST00000620394 EPPK1P58107 5090 aaKnown RBP17.1■□□□□ 0.33
SRRT-218ENST00000620394 RRHO14718 337 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 OR8U8P0C7N1 319 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 HSMCR30P0CW71 290 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 CRHBPP24387 322 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 TMEM50BP56557 158 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 RAB11BQ15907 218 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 ZNF660Q6AZW8 331 aaPredicted RBP17.1■□□□□ 0.33
SRRT-218ENST00000620394 TMEM65Q6PI78 240 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 PRSS48Q7RTY5 328 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 PTX4Q96A99 478 aa17.1■□□□□ 0.33
SRRT-218ENST00000620394 ABHD14BQ96IU4 210 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms