RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 GLRX2Q9NS18 164 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 POU2F2P09086 479 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 COX7A1P24310 79 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 CLDN18P56856 261 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TGIF2LYQ8IUE0 185 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 A0A0G2JK05 382 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM14DPA8MWL7 114 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 CRYABP02511 175 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 HOXA5P20719 270 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 OR8G5Q8NG78 346 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 SIPA1L3O60292 1781 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TRBV9A0A0B4J1U6 114 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 MKRN2OSH3BPM6 223 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 SRIP30626 198 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 CEBPDP49716 269 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 WDR74Q6RFH5 385 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM108Q6UXF1 575 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 Q8WTZ3 238 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 ASCL3Q9NQ33 180 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 IGHV1OR15-9A0A0B4J2B8 117 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 A6NJY4 79 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 CCL3P10147 92 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 LIFP15018 202 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM187Q14656 261 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 FGFRL1Q8N441 504 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 OR8B3Q8NGG8 313 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 AMY1AP04745 511 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 UCP3P55916 312 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 CTAG1AP78358 180 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 C2orf68Q2NKX9 166 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 HES3Q5TGS1 186 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM216AQ8WUB2 273 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 MARS2Q96GW9 593 aaKnown RBP9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF488Q96MN9 340 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 WFIKKN1Q96NZ8 548 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM206AQ9NX38 181 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 IL36RNQ9UBH0 155 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 TMSB15BA0A087X1C1 80 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM222BQ8WU58 562 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 PSMG3Q9BT73 122 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 FOXJ2Q9P0K8 574 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 CACNA1IQ9P0X4 2223 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 GRIFINA4D1Z8 144 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 HYPMO75409 117 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 VENTXO95231 258 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 HLA-DRB1P01911 266 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 OR4A8P0C604 315 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 SELENOTP62341 195 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 HERPUD1Q15011 391 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 OR2I1PQ8NGU4 316 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 SOSTQ9BQB4 213 aa9.22□□□□□ -0.93
CLTCL1-209ENST00000617103 RNF222A6NCQ9 220 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 IL11P20809 199 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 LCN2P80188 198 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 CYB5R2Q6BCY4 276 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SMIM8Q96KF7 97 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 LOC389332A0A1B0GUA5 103 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SPINT1O43278 529 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 EPHA8P29322 1005 aaPredicted RBP9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 PSG4Q00888 419 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 UNC119Q13432 240 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 MIC13Q5XKP0 118 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SPINK14Q6IE38 97 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SLC25A47Q6Q0C1 308 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SLC25A40Q8TBP6 338 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 SPSB4Q96A44 273 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 G6PC2Q9NQR9 355 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 COL18A1P39060 1754 aa9.21□□□□□ -0.93
CLTCL1-209ENST00000617103 DHRS7CA6NNS2 312 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 K7EQS6 105 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 KIAA1644Q3SXP7 199 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 PRNTQ86SH4 94 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 MMD2Q8IY49 270 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 Q96M66 194 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 CDX2Q99626 313 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 RNF7Q9UBF6 113 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 PILRAQ9UKJ1 303 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 KLF4O43474 513 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 TSPAN2O60636 221 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 RNF224P0DH78 156 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 BTF3P20290 206 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 ZXDCQ2QGD7 858 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 RPRMQ9NS64 109 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 ZDHHC8Q9ULC8 765 aa9.21□□□□□ -0.94
CLTCL1-209ENST00000617103 M0R3E3 92 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 MT-CO3P00414 261 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 KIR2DL1P43626 348 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 KIR2DL2P43627 348 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 CRYBA2P53672 197 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms