RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 APOA1P02647 267 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 GNG10P50151 68 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 EBI3Q14213 229 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 STEAP3Q658P3 488 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 LINC00299Q6ZSB3 139 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 OR10X1Q8NGY0 326 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 MRPL30Q8TCC3 161 aaKnown RBP14.95□□□□□ -0.02
CDX1-202ENST00000616154 NOL4LQ96MY1 436 aaPredicted RBP14.95□□□□□ -0.02
CDX1-202ENST00000616154 MCRIP2Q9BUT9 160 aaKnown RBP14.95□□□□□ -0.02
CDX1-202ENST00000616154 ZFP57Q9NU63 452 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 RHBDL2Q9NX52 303 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 TRAPPC2LQ9UL33 140 aa14.95□□□□□ -0.02
CDX1-202ENST00000616154 SERPINE3A8MV23 424 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 CTDSP2O14595 271 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 HSD17B6O14756 317 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 IGKV1D-33P01593 117 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 IGKV1-33P01594 117 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 IGHG2P01859 326 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 HBZP02008 142 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 RCC1P18754 421 aaPredicted RBP14.94□□□□□ -0.02
CDX1-202ENST00000616154 UBE2NLQ5JXB2 153 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 SLC25A48Q6ZT89 311 aaKnown RBP14.94□□□□□ -0.02
CDX1-202ENST00000616154 C8orf86Q6ZUL3 223 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 IZUMO1Q8IYV9 350 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 COMMD1Q8N668 190 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 OR4K15Q8NH41 348 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 CYYR1Q96J86 154 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.94□□□□□ -0.02
CDX1-202ENST00000616154 COMMD3Q9UBI1 195 aa14.94□□□□□ -0.02
CDX1-202ENST00000616154 A0A0A6YYD4 124 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 MYCNOSP40205 109 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 SLC35B1P78383 322 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 HNF4GQ14541 408 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 LY6G6FQ5SQ64 297 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 C18orf65Q6ZTR6 163 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 SLC35E3Q7Z769 313 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 SAMD12Q8N8I0 201 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 P2RX4Q99571 388 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 B9D2Q9BPU9 175 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 SULT4A1Q9BR01 284 aa14.93□□□□□ -0.02
CDX1-202ENST00000616154 URM1Q9BTM9 101 aaKnown RBP14.93□□□□□ -0.02
CDX1-202ENST00000616154 A0A0A6YYH2 397 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 IGHV1-3A0A0C4DH29 117 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 A0A1W2PPE3 182 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 A6NJ64 397 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 NUDT19A8MXV4 375 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 RAB27BO00194 218 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 HPGDSO60760 199 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 NAPSAO96009 420 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 GAPDHP04406 335 aaKnown RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 FAM53AQ6NSI3 398 aaPredicted RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 FOXRED2Q8IWF2 684 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 Q8N6K4 173 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 KLHL30-AS1Q8NEE0 82 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 OR6Q1Q8NGQ2 317 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 OR1L1Q8NH94 360 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 UBALD1Q8TB05 177 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 NEDD4LQ96PU5 975 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 TAF9BQ9HBM6 251 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 LINC00527Q9UJ94 153 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 UBE2QL1A1L167 161 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 TXNL1O43396 289 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 SCGNO76038 276 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 EIF4EP06730 217 aaKnown RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 ELK1P19419 428 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 IL3RAP26951 378 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 ZNF134P52741 427 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 HTD2P86397 168 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 CD69Q07108 199 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 DCTN2Q13561 401 aaKnown RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 HMGN3Q15651 99 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 CT45A1Q5HYN5 189 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 ZNF880Q6PDB4 577 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 LAX1Q8IWV1 398 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 STPG2Q8N412 459 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 CT45A3Q8NHU0 189 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 RTN4IP1Q8WWV3 396 aaPredicted RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 NICN1Q9BSH3 213 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 C6orf62Q9GZU0 229 aaPredicted RBP14.92□□□□□ -0.02
CDX1-202ENST00000616154 GNG12Q9UBI6 72 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 JPT1Q9UK76 154 aa14.92□□□□□ -0.02
CDX1-202ENST00000616154 TRBV6-6A0A0A6YYG2 114 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 IGHV3-43A0A0B4J1X8 118 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 METTL21EPA6NDL7 271 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 SLC31A2O15432 143 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 TPPPO94811 219 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 IGHV3-43DP0DP04 118 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 TMEM50BP56557 158 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 C6orf201Q7Z4U5 140 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 TGIF2LXQ8IUE1 241 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 ZNF695Q8IW36 515 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 OR56B1Q8NGI3 324 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 EAF1Q96JC9 268 aaPredicted RBP14.91□□□□□ -0.02
CDX1-202ENST00000616154 SOSTQ9BQB4 213 aa14.91□□□□□ -0.02
CDX1-202ENST00000616154 CD1BP29016 333 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 TNFSF8P32971 234 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 ETV6P41212 452 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 MOGAT2Q3SYC2 334 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 MORN2Q502X0 79 aa14.9□□□□□ -0.02
CDX1-202ENST00000616154 NKAPLQ5M9Q1 402 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms