RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	TMEM127	O75204	238 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	PROP1	O75360	226 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	DIRAS3	O95661	229 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	SAA2	P0DJI9	122 aa	Predicted RBP	13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	SNRPB	P14678	240 aa	Known RBP	13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	F2RL1	P55085	397 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	MXD1	Q05195	221 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	TIMM50	Q3ZCQ8	353 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	CDNF	Q49AH0	187 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	C9orf152	Q5JTZ5	239 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	NDUFA11	Q86Y39	141 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	EDARADD	Q8WWZ3	215 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	RBMXL1	Q96E39	390 aa	Known RBP	13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	S1PR3	Q99500	378 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	MRPL20	Q9BYC9	149 aa	Known RBP	13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	ABCG5	Q9H222	651 aa		13.22	□□□□□ -0.29
CCND3-222	ENST00000612455	NCBP2L	A6PVI3	153 aa	Known RBP	13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	FABP7	O15540	132 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	GSTT2	P0CG29	244 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	GSTT2B	P0CG30	244 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	CT45A6	P0DMU7	189 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	CT45A5	P0DMU8	189 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	CT45A7	P0DMV0	189 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	SERPINB10	P48595	397 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	MRPS15	P82914	257 aa	Known RBP	13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	KIR2DS1	Q14954	304 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	FAM71E2	Q8N5Q1	922 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	CABLES2	Q9BTV7	478 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	VCX3A	Q9NNX9	186 aa		13.21	□□□□□ -0.29
CCND3-222	ENST00000612455	ELF5	Q9UKW6	265 aa	Predicted RBP	13.21	□□□□□ -0.29
CCND3-222	ENST00000612455		A0A075B6Q4	140 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	TRBV6-7	A0A0A0MS04	114 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	LINC01548	A6NM66	108 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	HSPA12A	O43301	675 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	SCGN	O76038	276 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF260	Q3ZCT1	412 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	HACD4	Q5VWC8	232 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	C10orf99	Q6UWK7	81 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	OR5H6	Q8NGV6	325 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	LGALS14	Q8TCE9	139 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	ABHD14B	Q96IU4	210 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	RITA1	Q96K30	269 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	GAB2	Q9UQC2	676 aa		13.2	□□□□□ -0.3
CCND3-222	ENST00000612455	PLXNB1	O43157	2135 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	AIRE	O43918	545 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	GSTP1	P09211	210 aa	Known RBP	13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	DTYMK	P23919	212 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	TGFBR1	P36897	503 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	ARFRP1	Q13795	201 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	RPL39P5	Q59GN2	51 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	IGSF11	Q5DX21	431 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	SLC35E3	Q7Z769	313 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	CHPT1	Q8WUD6	406 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	SLC25A38	Q96DW6	304 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	RHBDL2	Q9NX52	303 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	RDH8	Q9NYR8	311 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	ETV7	Q9Y603	341 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	MEGF8	Q7Z7M0	2845 aa		13.19	□□□□□ -0.3
CCND3-222	ENST00000612455	NOTCH1	P46531	2555 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	IGKV1D-8	A0A087WSZ0	117 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	OPN1MW	P04001	364 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	OPN1MW2	P0DN77	364 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	OPN1MW3	P0DN78	364 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	RPS19	P39019	145 aa	Known RBP	13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	GPR12	P47775	334 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	ACTB	P60709	375 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	PNLIPRP3	Q17RR3	467 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	NSUN5P1	Q3KNT7	163 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	IDNK	Q5T6J7	187 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	CROCCP3	Q8IVE0	287 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	NPB	Q8NG41	125 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	OR5AN1	Q8NGI8	311 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	MAFIP	Q8WZ33	124 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	PHF21A	Q96BD5	680 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	NOL4L	Q96MY1	436 aa	Predicted RBP	13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	RASL11B	Q9BPW5	248 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	DCSTAMP	Q9H295	470 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	RNF150	Q9ULK6	438 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	SPATA2	Q9UM82	520 aa		13.18	□□□□□ -0.3
CCND3-222	ENST00000612455	PSMB11	A5LHX3	300 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	RRP9	O43818	475 aa	Known RBP	13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	NDUFA3	O95167	84 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	MC5R	P33032	325 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	TALDO1	P37837	337 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	PITPNA	Q00169	270 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	FOXRED2	Q8IWF2	684 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	STPG2	Q8N412	459 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	OR4X2	Q8NGF9	303 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	OR10J5	Q8NHC4	309 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	ZNF580	Q9UK33	172 aa		13.17	□□□□□ -0.3
CCND3-222	ENST00000612455	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.17	□□□□□ -0.3
CCND3-222	ENST00000612455		A0A0A6YYH2	397 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	TCRBV4S1A1T	A0A5B7	111 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	OR5H14	A6NHG9	310 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455		A6NJ64	397 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455		H0YJW9	148 aa		13.16	□□□□□ -0.3
CCND3-222	ENST00000612455	AP4M1	O00189	453 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms