RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 OR2G3Q8NGZ4 309 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 EIF5A2Q9GZV4 153 aaKnown RBP13.3□□□□□ -0.28
CTSA-214ENST00000606788 WIPI2Q9Y4P8 454 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 C17orf98A8MV24 154 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 PRSS44E7EML9 344 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 J3QW42 95 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 TSPAN15O95858 294 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 KITLGP21583 273 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 ATP6V0CP27449 155 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 CCKARP32238 428 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 MDH2P40926 338 aaKnown RBP13.3□□□□□ -0.28
CTSA-214ENST00000606788 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
CTSA-214ENST00000606788 OR5D13Q8NGL4 314 aa13.3□□□□□ -0.28
CTSA-214ENST00000606788 PRRG2O14669 202 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 SULT1A2P50226 295 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 RND3P61587 244 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 EIF5AP63241 154 aaKnown RBP13.29□□□□□ -0.28
CTSA-214ENST00000606788 OR8G2PQ6IF36 304 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 VKORC1L1Q8N0U8 176 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 Q8NA96 180 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 AKR1E2Q96JD6 320 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 TIMM23BQ5SRD1 257 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
CTSA-214ENST00000606788 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 TNCP24821 2201 aa13.29□□□□□ -0.28
CTSA-214ENST00000606788 A8MXE2 369 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 S1PR2O95136 353 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 NPBWR1P48145 328 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 PAX9P55771 341 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 HMGN3Q15651 99 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 UBAC2Q8NBM4 344 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
CTSA-214ENST00000606788 PLEKHF2Q9H8W4 249 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 HES4Q9HCC6 221 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 ZNRD1Q9P1U0 126 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 TRBV6-6A0A0A6YYG2 114 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 ATG12O94817 140 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
CTSA-214ENST00000606788 EIF4E3Q8N5X7 224 aaKnown RBP13.28□□□□□ -0.28
CTSA-214ENST00000606788 SMIM8Q96KF7 97 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
CTSA-214ENST00000606788 RNASEK-C17orf49H0YIS7 233 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 CDK2AP1O14519 115 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 SFTA3P0C7M3 94 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 CCL20P78556 96 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 ID3Q02535 119 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 RSG1Q9BU20 258 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 KCNJ16Q9NPI9 418 aa13.28□□□□□ -0.28
CTSA-214ENST00000606788 CSMD1Q96PZ7 3565 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 LINC00473A8K010 186 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 TOR1AO14656 332 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 RPL39P5Q59GN2 51 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 GPR157Q5UAW9 335 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 MEGF10Q96KG7 1140 aa13.27□□□□□ -0.28
CTSA-214ENST00000606788 LYRM2Q9NU23 88 aaPredicted RBP13.27□□□□□ -0.28
CTSA-214ENST00000606788 ARL16Q0P5N6 197 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTSA-214ENST00000606788 MBNL2Q5VZF2 373 aaKnown RBP13.27□□□□□ -0.29
CTSA-214ENST00000606788 MOB1BQ7L9L4 216 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 THNSL2Q86YJ6 484 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 NEUROG1Q92886 237 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 POM121Q96HA1 1249 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 CCL13Q99616 98 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 IFT22Q9H7X7 185 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 CLN8Q9UBY8 286 aa13.27□□□□□ -0.29
CTSA-214ENST00000606788 OOEPA6NGQ2 149 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 CLDN1O95832 211 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 GYPAP02724 150 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 CD40P25942 277 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
CTSA-214ENST00000606788 GAPDHP04406 335 aaKnown RBP13.26□□□□□ -0.29
CTSA-214ENST00000606788 CD55P08174 381 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 OR13C7P0DN81 318 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 OR2B8PP59922 312 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 TNFAIP6P98066 277 aaPredicted RBP13.26□□□□□ -0.29
CTSA-214ENST00000606788 TBR1Q16650 682 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 FAM216BQ8N7L0 139 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 RARRES2Q99969 163 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 C19orf12Q9NSK7 152 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 ABCA1O95477 2261 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 NUBP1P53384 320 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 PSENENQ9NZ42 101 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 RNF115Q9Y4L5 304 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 PIEZO1Q92508 2521 aa13.26□□□□□ -0.29
CTSA-214ENST00000606788 RAB19A4D1S5 217 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
CTSA-214ENST00000606788 DAOP14920 347 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 GNG10P50151 68 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 ZNF273Q14593 569 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
CTSA-214ENST00000606788 CACFD1Q9UGQ2 172 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 DNASE2O00115 360 aaPredicted RBP13.25□□□□□ -0.29
CTSA-214ENST00000606788 SLC31A2O15432 143 aa13.25□□□□□ -0.29
CTSA-214ENST00000606788 FBP1P09467 338 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms