RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
HERC3-214ENST00000601319 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 AP4M1O00189 453 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 ST8SIA5O15466 376 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 FCGR3AP08637 254 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 SCTP09683 121 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 SERPINB10P48595 397 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 SCAND1P57086 179 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 KIR2DS1Q14954 304 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 SFXN4Q6P4A7 337 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 R3HDM4Q96D70 268 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 CHCHD6Q9BRQ6 235 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 CABLES2Q9BTV7 478 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 TOLLIPQ9H0E2 274 aa13.58□□□□□ -0.24
HERC3-214ENST00000601319 PARP12Q9H0J9 701 aaKnown RBP13.58□□□□□ -0.24
HERC3-214ENST00000601319 IGKV1-6A0A0C4DH72 117 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 TCRBV4S1A1TA0A5B7 111 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 HSPA12AO43301 675 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 SCGNO76038 276 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 CD36P16671 472 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 SRSF7Q16629 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
HERC3-214ENST00000601319 C10orf99Q6UWK7 81 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 Q6ZS49 121 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 STPG2Q8N412 459 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 COMMD1Q8N668 190 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 RASL11BQ9BPW5 248 aa13.57□□□□□ -0.24
HERC3-214ENST00000601319 C11orf54Q9H0W9 315 aaPredicted RBP13.57□□□□□ -0.24
HERC3-214ENST00000601319 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 FABP7O15540 132 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 GNB3P16520 340 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 SDC2P34741 201 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 CEACAM6P40199 344 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 F2RL1P55085 397 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 ACTBP60709 375 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 SLC35B1P78383 322 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 MMDQ15546 238 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 PHF21AQ96BD5 680 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 NOL4LQ96MY1 436 aaPredicted RBP13.56□□□□□ -0.24
HERC3-214ENST00000601319 GON7Q9BXV9 100 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 ATG5Q9H1Y0 275 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 DAPK2Q9UIK4 370 aa13.56□□□□□ -0.24
HERC3-214ENST00000601319 A0A087WXM4 84 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 LOC100506127A0A0U1RQW1 187 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 WIPF1O43516 503 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 TMEM127O75204 238 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 SOX6P35712 828 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 DEFA6Q01524 100 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 RPL39P5Q59GN2 51 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.55□□□□□ -0.24
HERC3-214ENST00000601319 TSPAN14Q8NG11 270 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 LGALS14Q8TCE9 139 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 ABHD14BQ96IU4 210 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 CENPOQ9BU64 300 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 RDH8Q9NYR8 311 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 ETV7Q9Y603 341 aa13.55□□□□□ -0.24
HERC3-214ENST00000601319 TGP01266 2768 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 A0A075B6Q4 140 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 TRBV6-7A0A0A0MS04 114 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 A0A1W2PRX2 142 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 NBR2O15453 112 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
HERC3-214ENST00000601319 NDUFA3O95167 84 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 HLA-DRB1P01911 266 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 IGF1P05019 195 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 GSTP1P09211 210 aaKnown RBP13.54□□□□□ -0.24
HERC3-214ENST00000601319 CT45A6P0DMU7 189 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 CT45A5P0DMU8 189 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 CT45A7P0DMV0 189 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 SNRPBP14678 240 aaKnown RBP13.54□□□□□ -0.24
HERC3-214ENST00000601319 DTYMKP23919 212 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 SLC6A1P30531 599 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 MC5RP33032 325 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 ARFRP1Q13795 201 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 KPRPQ5T749 579 aaPredicted RBP13.54□□□□□ -0.24
HERC3-214ENST00000601319 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 NPBQ8NG41 125 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 OR5AN1Q8NGI8 311 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 HSPB9Q9BQS6 159 aa13.54□□□□□ -0.24
HERC3-214ENST00000601319 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 LINC01548A6NM66 108 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 H0YJW9 148 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 RBBP9O75884 186 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 PF4V1P10720 104 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 TALDO1P37837 337 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 MXD1Q05195 221 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 HACD4Q5VWC8 232 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 OR10J5Q8NHC4 309 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 RNF167Q9H6Y7 350 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 ZFP57Q9NU63 452 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 RHBDL2Q9NX52 303 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
HERC3-214ENST00000601319 ZNF221Q9UK13 617 aa13.53□□□□□ -0.24
HERC3-214ENST00000601319 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms