RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PFDN1O60925 122 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 CD34P28906 385 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 SLC9A3R2Q15599 337 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 UTF1Q5T230 341 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 SLC25A48Q6ZT89 311 aaKnown RBP18.5■□□□□ 0.55
IRF3-228ENST00000601291 C12orf45Q8N5I9 185 aaPredicted RBP18.5■□□□□ 0.55
IRF3-228ENST00000601291 C8orf31Q8N9H6 132 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 GALNT14Q96FL9 552 aa18.5■□□□□ 0.55
IRF3-228ENST00000601291 POLR3KQ9Y2Y1 108 aaPredicted RBP18.5■□□□□ 0.55
IRF3-228ENST00000601291 A0A1W2PPE3 182 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 RNF212BA8MTL3 300 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 SLC31A2O15432 143 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 PGLYRP1O75594 196 aaPredicted RBP18.49■□□□□ 0.55
IRF3-228ENST00000601291 ARF6P62330 175 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 PRSS57Q6UWY2 283 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 BTNL3Q6UXE8 466 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 KCTD9Q7L273 389 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 COQ8AQ8NI60 647 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 MITD1Q8WV92 249 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 METTL8Q9H825 291 aaKnown RBP18.49■□□□□ 0.55
IRF3-228ENST00000601291 PIPOXQ9P0Z9 390 aa18.49■□□□□ 0.55
IRF3-228ENST00000601291 MALRD1Q5VYJ5 2156 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 C3orf85A0A1B0GTC6 90 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 FAM157AC9JC47 383 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 C1orf122Q6ZSJ8 110 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 ABHD12Q8N2K0 398 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 UXS1Q8NBZ7 420 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.48■□□□□ 0.55
IRF3-228ENST00000601291 OR9G1Q8NH87 305 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 SDHAF2Q9NX18 166 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 KPTNQ9Y664 436 aa18.48■□□□□ 0.55
IRF3-228ENST00000601291 RAB29O14966 203 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 B3GALNT1O75752 331 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 OR5AC1P0C628 307 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 PAX2Q02962 417 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 LYG1Q8N1E2 194 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 GAB2Q9UQC2 676 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 TOR1AO14656 332 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 F2RP25116 425 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 CATR1Q13166 79 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 AKAP14Q86UN6 197 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 LINC00311Q8N616 119 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 Q8N7P7 452 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 OR13D1Q8NGV5 346 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 TNFRSF14Q92956 283 aa18.47■□□□□ 0.55
IRF3-228ENST00000601291 LIN7CQ9NUP9 197 aaKnown RBP18.47■□□□□ 0.55
IRF3-228ENST00000601291 ARID1AO14497 2285 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 SPG11Q96JI7 2443 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 IGHV2-26A0A0B4J1V2 119 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 A0A0B4J2A0 478 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 J3QR06 171 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 FCN2Q15485 313 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 ZNF66Q6ZN08 573 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 OR10X1Q8NGY0 326 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 OR51H1Q8NH63 302 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 ZNF596Q8TC21 504 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 GPHA2Q96T91 129 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 HSD17B10Q99714 261 aaKnown RBP18.46■□□□□ 0.55
IRF3-228ENST00000601291 CLEC7AQ9BXN2 247 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 LPAR2Q9HBW0 351 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 SHPKQ9UHJ6 478 aa18.46■□□□□ 0.55
IRF3-228ENST00000601291 DOCK11Q5JSL3 2073 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 PTPN13Q12923 2485 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 SAA2-SAA4A0A096LPE2 208 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 H0Y980 276 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 SAA2P0DJI9 122 aaPredicted RBP18.45■□□□□ 0.54
IRF3-228ENST00000601291 SULT1A3P0DMM9 295 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 SULT1A4P0DMN0 295 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 PRTN3P24158 256 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 PRRX1P54821 245 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 SRPXP78539 464 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 C5orf30Q96GV9 206 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 TP53RKQ96S44 253 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 S1PR3Q99500 378 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 MMP26Q9NRE1 261 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 CELSR2Q9HCU4 2923 aa18.45■□□□□ 0.54
IRF3-228ENST00000601291 YLPM1P49750 1951 aaKnown RBP18.45■□□□□ 0.54
IRF3-228ENST00000601291 ZNF16P17020 682 aaPredicted RBP18.44■□□□□ 0.54
IRF3-228ENST00000601291 DVL1P1P54792 670 aaPredicted RBP18.44■□□□□ 0.54
IRF3-228ENST00000601291 TMEM187Q14656 261 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 ANKRD55Q3KP44 614 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 SP6Q3SY56 376 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 LIN54Q6MZP7 749 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 TMEM222Q9H0R3 208 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 HEXA-AS1Q9H8Q6 139 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 SIRT7Q9NRC8 400 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 MGAT4CQ9UBM8 478 aa18.44■□□□□ 0.54
IRF3-228ENST00000601291 M0R1X1 148 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 CCNKO75909 580 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 COX7A1P24310 79 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 IL3RAP26951 378 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 LOXL1Q08397 574 aaPredicted RBP18.43■□□□□ 0.54
IRF3-228ENST00000601291 EIF4EBP1Q13541 118 aaPredicted RBP18.43■□□□□ 0.54
IRF3-228ENST00000601291 RPL39P5Q59GN2 51 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 LIAT1Q6ZQX7 453 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 ODF3L1Q8IXM7 274 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 PRR13Q9NZ81 148 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 TACC2O95359 2948 aa18.43■□□□□ 0.54
IRF3-228ENST00000601291 GOSR2O14653 212 aa18.42■□□□□ 0.54
IRF3-228ENST00000601291 VMO1Q7Z5L0 202 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms