RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 FAM71F2Q6NXP2 309 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 DTX3Q8N9I9 347 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 OR4A4PQ8NGN8 299 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 TMEM235A6NFC5 223 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 M0QZK8 103 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 SSX5O60225 188 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 TSPAN15O95858 294 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
RPS28-203ENST00000600659 CDNFQ49AH0 187 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 RPL39P5Q59GN2 51 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 Q8N9W7 124 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 ABHD14BQ96IU4 210 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
RPS28-203ENST00000600659 SPATA2Q9UM82 520 aa12.48□□□□□ -0.41
RPS28-203ENST00000600659 TRBV6-7A0A0A0MS04 114 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 DIRAS3O95661 229 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 MOSP00540 346 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 CD28P10747 220 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 DTYMKP23919 212 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 ZBTB25P24278 435 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 CEACAM6P40199 344 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 TCTEX1D4Q5JR98 221 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 HACD4Q5VWC8 232 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 C10orf99Q6UWK7 81 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 FAM71E2Q8N5Q1 922 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 OR2T10Q8NGZ9 312 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 C5orf30Q96GV9 206 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 RITA1Q96K30 269 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 RDH8Q9NYR8 311 aa12.47□□□□□ -0.41
RPS28-203ENST00000600659 TMEM127O75204 238 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 GABARAPO95166 117 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 TFAP2AP05549 437 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 GSTP1P09211 210 aaKnown RBP12.46□□□□□ -0.41
RPS28-203ENST00000600659 CT45A6P0DMU7 189 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 CT45A5P0DMU8 189 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 CT45A7P0DMV0 189 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 ALDH3B2P48448 385 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 F2RL1P55085 397 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 KIR2DS1Q14954 304 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 PIPOXQ9P0Z9 390 aa12.46□□□□□ -0.41
RPS28-203ENST00000600659 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 RAB29O14966 203 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 FBXO24O75426 580 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 SCGNO76038 276 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 IGHG2P01859 326 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 CNTFRP26992 372 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 VBP1P61758 197 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 ARL6IP1Q15041 203 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 CTF1Q16619 201 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 EDARADDQ8WWZ3 215 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 SLC25A46Q96AG3 418 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 S1PR3Q99500 378 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 ABCG5Q9H222 651 aa12.45□□□□□ -0.42
RPS28-203ENST00000600659 H0YJW9 148 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 M0QZ24 198 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 HSPA12AO43301 675 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 SERPINB10P48595 397 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 LINC00205P59089 165 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 MRPS15P82914 257 aaKnown RBP12.44□□□□□ -0.42
RPS28-203ENST00000600659 CD83Q01151 205 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 PNLIPRP3Q17RR3 467 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 FAM131AQ6UXB0 335 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
RPS28-203ENST00000600659 ANKRD13BQ86YJ7 626 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 OR5AN1Q8NGI8 311 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 CITED2Q99967 270 aaPredicted RBP12.44□□□□□ -0.42
RPS28-203ENST00000600659 HSPB9Q9BQS6 159 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 MRPS26Q9BYN8 205 aaKnown RBP12.44□□□□□ -0.42
RPS28-203ENST00000600659 LIN7CQ9NUP9 197 aaKnown RBP12.44□□□□□ -0.42
RPS28-203ENST00000600659 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
RPS28-203ENST00000600659 A0A0A6YYH2 397 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 A6NJ64 397 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 BET1O15155 118 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 PTHLHP12272 177 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 CROCCP3Q8IVE0 287 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
RPS28-203ENST00000600659 OR8H1Q8NGG4 311 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 NOL4LQ96MY1 436 aaPredicted RBP12.43□□□□□ -0.42
RPS28-203ENST00000600659 DCSTAMPQ9H295 470 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 GHITMQ9H3K2 345 aa12.43□□□□□ -0.42
RPS28-203ENST00000600659 TRAV18A0A075B6X5 111 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 NCBP2LA6PVI3 153 aaKnown RBP12.42□□□□□ -0.42
RPS28-203ENST00000600659 NDUFA3O95167 84 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 TALDO1P37837 337 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 GPR12P47775 334 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 GNG2P59768 71 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 ACTBP60709 375 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 C2orf68Q2NKX9 166 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 ARSJQ5FYB0 599 aaPredicted RBP12.42□□□□□ -0.42
RPS28-203ENST00000600659 ZNF383Q8NA42 475 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 OR5AU1Q8NGC0 362 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 MMP27Q9H306 513 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 AUNIPQ9H7T9 357 aa12.42□□□□□ -0.42
RPS28-203ENST00000600659 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms