RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SMIM30A4D0T7 59 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 RAB29O14966 203 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 SSX5O60225 188 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 PEX14O75381 377 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 SCGNO76038 276 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 NDUFA3O95167 84 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 MOSP00540 346 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 LPLP06858 475 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CT45A6P0DMU7 189 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CT45A5P0DMU8 189 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CT45A7P0DMV0 189 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CD28P10747 220 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 SNRPBP14678 240 aaKnown RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 TMEM11P17152 192 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 ZBTB25P24278 435 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 TGFBR1P36897 503 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 RPS19P39019 145 aaKnown RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 VDAC2P45880 294 aaPredicted RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 ALDH3B2P48448 385 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 F2RL1P55085 397 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CFHR3Q02985 330 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 ARL6IP1Q15041 203 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 HACD4Q5VWC8 232 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 HIST2H2BDQ6DRA6 164 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 LYG1Q8N1E2 194 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 NPBQ8NG41 125 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 OR2AK2Q8NG84 335 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 OR2T10Q8NGZ9 312 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 FAM110DQ8TAY7 271 aaPredicted RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 CAPSLQ8WWF8 208 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 RBMXL1Q96E39 390 aaKnown RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 C5orf30Q96GV9 206 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 RITA1Q96K30 269 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 S1PR3Q99500 378 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 MRPL20Q9BYC9 149 aaKnown RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 DCSTAMPQ9H295 470 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 LIN7CQ9NUP9 197 aaKnown RBP6.94□□□□□ -1.3
SSBP4-208ENST00000600628 PIPOXQ9P0Z9 390 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 ABRACLQ9P1F3 81 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 DAPK2Q9UIK4 370 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 SPATA2Q9UM82 520 aa6.94□□□□□ -1.3
SSBP4-208ENST00000600628 LOC100506127A0A0U1RQW1 187 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 SH2D7A6NKC9 451 aaPredicted RBP6.93□□□□□ -1.3
SSBP4-208ENST00000600628 LINC01548A6NM66 108 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 H0YJW9 148 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 ST8SIA5O15466 376 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 FABP7O15540 132 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 AIREO43918 545 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 FBXO24O75426 580 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 TFAP2AP05549 437 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CD3GP09693 182 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 GSTT2P0CG29 244 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 GSTT2BP0CG30 244 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CEACAM6P40199 344 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 SERPINB10P48595 397 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CRIP2P52943 208 aaPredicted RBP6.93□□□□□ -1.3
SSBP4-208ENST00000600628 KIR2DS1Q14954 304 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CTF1Q16619 201 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 PNLIPRP3Q17RR3 467 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CDNFQ49AH0 187 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 ARSJQ5FYB0 599 aaPredicted RBP6.93□□□□□ -1.3
SSBP4-208ENST00000600628 C10orf99Q6UWK7 81 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 MOB3BQ86TA1 216 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 NDUFA11Q86Y39 141 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 CROCCP3Q8IVE0 287 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.93□□□□□ -1.3
SSBP4-208ENST00000600628 IL1F10Q8WWZ1 152 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 EDARADDQ8WWZ3 215 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 SLC25A46Q96AG3 418 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 FUNDC2Q9BWH2 189 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 ZNF230Q9UIE0 474 aaPredicted RBP6.93□□□□□ -1.3
SSBP4-208ENST00000600628 ANAPC10Q9UM13 185 aa6.93□□□□□ -1.3
SSBP4-208ENST00000600628 TMEM235A6NFC5 223 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 OR5H14A6NHG9 310 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 KCNAB3O43448 404 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 WIPF1O43516 503 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 TUSC2O75896 110 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 GABARAPO95166 117 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 HLA-DRB1P01911 266 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 OPN1MWP04001 364 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 IGF1P05019 195 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 GPR12P47775 334 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 PITPNAQ00169 270 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 DEFA6Q01524 100 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 MXD1Q05195 221 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 EIF4EBP1Q13541 118 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 HNF4GQ14541 408 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 RPL39P5Q59GN2 51 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 CENPVQ7Z7K6 275 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 ANKRD13BQ86YJ7 626 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 H1FOOQ8IZA3 346 aaPredicted RBP6.92□□□□□ -1.3
SSBP4-208ENST00000600628 ZNF383Q8NA42 475 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
SSBP4-208ENST00000600628 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms