RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 TYMSP04818 313 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 TDGF1P13385 188 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 IER3P46695 156 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 PLPPR5Q32ZL2 321 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 TMEM211Q6ICI0 200 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 PSMG3Q9BT73 122 aaPredicted RBP13.72□□□□□ -0.21
SYDE1-204ENST00000600440 LRRC61Q9BV99 259 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 FCN1O00602 326 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 WDR1O75083 606 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 AMTP48728 403 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 TFF3Q07654 80 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 DEFB133Q30KQ1 61 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 LHFPL2Q6ZUX7 228 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 OR2M3Q8NG83 312 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 MRPL18Q9H0U6 180 aaKnown RBP13.72□□□□□ -0.21
SYDE1-204ENST00000600440 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
SYDE1-204ENST00000600440 LOC102725191A0A1B0GVB3 256 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 RBFOX2O43251 390 aaKnown RBP eCLIP13.71□□□□□ -0.21
SYDE1-204ENST00000600440 MYF5P13349 255 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 BCL3P20749 454 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 NTF3P20783 257 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 BPIFB3P59826 476 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 GCSAMLQ5JQS6 135 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 OR5D13Q8NGL4 314 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 ABHD14BQ96IU4 210 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 GAL3ST2Q9H3Q3 398 aa13.71□□□□□ -0.21
SYDE1-204ENST00000600440 PTRH2Q9Y3E5 179 aaKnown RBP13.71□□□□□ -0.21
SYDE1-204ENST00000600440 IGKV1-6A0A0C4DH72 117 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 B4GALT1P15291 398 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 MAJINQ3KP22 176 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 ADPRHL1Q8NDY3 354 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 OR1L3Q8NH93 324 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.22
SYDE1-204ENST00000600440 TRAV38-1A0A0B4J264 116 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 F6UZH7 168 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 H0Y980 276 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 DHHO43323 396 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 YPEL1O60688 119 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 IGLV3-1P01715 115 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 LINC00310P59036 64 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 SELENOTP62341 195 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 YPEL5P62699 121 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 LCN2P80188 198 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 YPEL2Q96QA6 119 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 ELOVL5Q9NYP7 299 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 CEP290O15078 2479 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 TUSC2O75896 110 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 VAMP3Q15836 100 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 SAXO1Q8IYX7 474 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 ZNF586Q9NXT0 402 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 CLN8Q9UBY8 286 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 NKX6-3A6NJ46 265 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 GDF9O60383 454 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 GNB1P62873 340 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 ARF1P84077 181 aaKnown RBP13.7□□□□□ -0.22
SYDE1-204ENST00000600440 PARD6GQ9BYG4 376 aaPredicted RBP13.7□□□□□ -0.22
SYDE1-204ENST00000600440 PCED1AQ9H1Q7 454 aa13.7□□□□□ -0.22
SYDE1-204ENST00000600440 CBR3O75828 277 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 WNT2P09544 360 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 DRD1P21728 446 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 UBE2NP61088 152 aaKnown RBP13.69□□□□□ -0.22
SYDE1-204ENST00000600440 RABEPKQ7Z6M1 372 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 KMT5CQ86Y97 462 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 TBL2Q9Y4P3 447 aaKnown RBP13.69□□□□□ -0.22
SYDE1-204ENST00000600440 FRYLO94915 3013 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 FER1L5A0AVI2 2057 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 SPTY2D1-AS1A0A0U1RR47 76 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 SNURFLB1AK76 121 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 CENPVQ7Z7K6 275 aaPredicted RBP13.69□□□□□ -0.22
SYDE1-204ENST00000600440 FAM19A2Q8N3H0 131 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 ZNF441Q8N8Z8 693 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 SFRP2Q96HF1 295 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 ZNF488Q96MN9 340 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 SPOCK3Q9BQ16 436 aa13.69□□□□□ -0.22
SYDE1-204ENST00000600440 SSPNQ14714 243 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 AARDQ4LEZ3 155 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 OR1A1Q9P1Q5 309 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 IGKV1-39P01597 117 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 IGKV1D-39P04432 117 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 OTX2P32243 289 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 EML6Q6ZMW3 1958 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 COL4A2P08572 1712 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 BRWD1Q9NSI6 2320 aa13.68□□□□□ -0.22
SYDE1-204ENST00000600440 HYPMO75409 117 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 KRASP01116 189 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 IGKV1-5P01602 117 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 IGHV3-9P01782 118 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 GPM6AP51674 278 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 EDDM3BP56851 147 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 KLF3P57682 345 aaPredicted RBP13.67□□□□□ -0.22
SYDE1-204ENST00000600440 RAET1LQ5VY80 246 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 MTIF3Q9H2K0 278 aaKnown RBP13.67□□□□□ -0.22
SYDE1-204ENST00000600440 HIPK2Q9H2X6 1198 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 UQCR10Q9UDW1 63 aa13.67□□□□□ -0.22
SYDE1-204ENST00000600440 COX5AP20674 150 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms