RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 NAPSAO96009 420 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 GSTP1P09211 210 aaKnown RBP7.64□□□□□ -1.19
VRK3-216ENST00000599342 UCHL1P09936 223 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 HSMCR30P0CW71 290 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 ARSBP15848 533 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 PPIFP30405 207 aaKnown RBP7.64□□□□□ -1.19
VRK3-216ENST00000599342 HLA-DRB3P79483 266 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 ZNF616Q08AN1 781 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 ZNF491Q8N8L2 437 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 NPBQ8NG41 125 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 MYOZ3Q8TDC0 251 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 ABHD5Q8WTS1 349 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 TMEM203Q969S6 136 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 RITA1Q96K30 269 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 WWC2-AS2Q96NR7 200 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 OR5B12Q96R08 314 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 PRR25Q96S07 402 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 GHITMQ9H3K2 345 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 GNB4Q9HAV0 340 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 SLC23A1Q9UHI7 598 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 MGAT4AQ9UM21 535 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 LSM2Q9Y333 95 aaKnown RBP7.64□□□□□ -1.19
VRK3-216ENST00000599342 TPRKBQ9Y3C4 175 aa7.64□□□□□ -1.19
VRK3-216ENST00000599342 A0A1W2PN81 502 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 I3L521 148 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 ARL6IP5O75915 188 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 LY86O95711 162 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 IGLV1-40P01703 118 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 NHLRC4P0CG21 123 aaPredicted RBP7.63□□□□□ -1.19
VRK3-216ENST00000599342 ZBTB25P24278 435 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 PSMA1P25786 263 aaKnown RBP7.63□□□□□ -1.19
VRK3-216ENST00000599342 MC5RP33032 325 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 CHRNA7P36544 502 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 RANBP1P43487 201 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 RAB9AP51151 201 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 INSL3P51460 131 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 RUNX1Q01196 453 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 P2RY14Q15391 338 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 TRAM1Q15629 374 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 RAB11BQ15907 218 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 RPL39P5Q59GN2 51 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 ZNF660Q6AZW8 331 aaPredicted RBP7.63□□□□□ -1.19
VRK3-216ENST00000599342 ZNF880Q6PDB4 577 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 TCTEX1D1Q8N7M0 179 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 OR1N2Q8NGR9 330 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 ABHD14BQ96IU4 210 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 LPAR5Q9H1C0 372 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 KLK15Q9H2R5 256 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 FBXL15Q9H469 300 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 C12orf4Q9NQ89 552 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 AK3Q9UIJ7 227 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
VRK3-216ENST00000599342 ZNF256Q9Y2P7 627 aaPredicted RBP7.63□□□□□ -1.19
VRK3-216ENST00000599342 WASHC3Q9Y3C0 194 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 A3GALT2U3KPV4 340 aa7.63□□□□□ -1.19
VRK3-216ENST00000599342 A0A0A6YYD4 124 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 TRBV6-6A0A0A6YYG2 114 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 H0YJW9 148 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 SLC17A2O00624 439 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 ITGB1BP1O14713 200 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 RRHO14718 337 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 SOCS1O15524 211 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 RBBP9O75884 186 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CT45A6P0DMU7 189 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CT45A5P0DMU8 189 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CT45A7P0DMV0 189 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CD40LGP29965 261 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CEACAM6P40199 344 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 AQP4P55087 323 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 GNB1P62873 340 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 MRPS15P82914 257 aaKnown RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 QRFPP83859 136 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 TMEM267Q0VDI3 215 aaPredicted RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 IRF3Q14653 427 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 GLDNQ6ZMI3 551 aaPredicted RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 MINDY2Q8NBR6 621 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 CMSS1Q9BQ75 279 aaKnown RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 HDHD3Q9BSH5 251 aaPredicted RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 CCDC90BQ9GZT6 254 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 ISYNA1Q9NPH2 558 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 OR1A1Q9P1Q5 309 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 SCOCQ9UIL1 159 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 ZNF221Q9UK13 617 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 RNF150Q9ULK6 438 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 HSF4Q9ULV5 492 aa7.62□□□□□ -1.19
VRK3-216ENST00000599342 AK6Q9Y3D8 172 aaKnown RBP7.62□□□□□ -1.19
VRK3-216ENST00000599342 ANKRD65E5RJM6 399 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 OVOL1O14753 267 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 RGS10O43665 173 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 CD37P11049 281 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 CPEP16870 476 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 CALRP27797 417 aaKnown RBP7.61□□□□□ -1.19
VRK3-216ENST00000599342 VEGFCP49767 419 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 CRIP2P52943 208 aaPredicted RBP7.61□□□□□ -1.19
VRK3-216ENST00000599342 RPS25P62851 125 aaKnown RBP7.61□□□□□ -1.19
VRK3-216ENST00000599342 CX3CL1P78423 397 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 NDPQ00604 133 aa7.61□□□□□ -1.19
VRK3-216ENST00000599342 MLLT11Q13015 90 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms