RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
XRCC1-206ENST00000597811 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
XRCC1-206ENST00000597811 COMMD3Q9UBI1 195 aa12.33□□□□□ -0.44
XRCC1-206ENST00000597811 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
XRCC1-206ENST00000597811 M0QZK8 103 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 LANCL1O43813 399 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 NOL3O60936 208 aaKnown RBP12.32□□□□□ -0.44
XRCC1-206ENST00000597811 VDAC2P45880 294 aaPredicted RBP12.32□□□□□ -0.44
XRCC1-206ENST00000597811 OR3A3P47888 321 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 RORCP51449 518 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 DEFA6Q01524 100 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 IGSF11Q5DX21 431 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 UBE2NLQ5JXB2 153 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 ABHD14BQ96IU4 210 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF702PQ9H963 129 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF221Q9UK13 617 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
XRCC1-206ENST00000597811 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 SAA2-SAA4A0A096LPE2 208 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 A0A0A6YYH2 397 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 A6NJ64 397 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 FAM90A9PA6NNJ1 464 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 RAB29O14966 203 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 GABARAPO95166 117 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 TFAP2AP05549 437 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 DTYMKP23919 212 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 CD1BP29016 333 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 HERPUD1Q15011 391 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 PNLIPRP3Q17RR3 467 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 LY6G6FQ5SQ64 297 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 C11orf88Q6PI97 169 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 CLVS1Q8IUQ0 354 aaPredicted RBP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 KLHDC1Q8N7A1 406 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 C11orf54Q9H0W9 315 aaPredicted RBP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 DCSTAMPQ9H295 470 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.44
XRCC1-206ENST00000597811 RDH8Q9NYR8 311 aa12.31□□□□□ -0.44
XRCC1-206ENST00000597811 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF736B4DX44 427 aaPredicted RBP12.3□□□□□ -0.44
XRCC1-206ENST00000597811 MOSP00540 346 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 GPR12P47775 334 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 ALDH3B2P48448 385 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF137PP52743 207 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 C2orf68Q2NKX9 166 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 RPL39P5Q59GN2 51 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 MZT2AQ6P582 158 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 Q6ZS46 218 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 ODF3L1Q8IXM7 274 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
XRCC1-206ENST00000597811 EAF1Q96JC9 268 aaPredicted RBP12.3□□□□□ -0.44
XRCC1-206ENST00000597811 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
XRCC1-206ENST00000597811 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
XRCC1-206ENST00000597811 NOTCH3Q9UM47 2321 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 SMIM31A0A1B0GVY4 71 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 J3QRK9 145 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 FCER2P06734 321 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 OR8U9P0C7N5 309 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 ARPC4P59998 168 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 CTF1Q16619 201 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 TMEM69Q5SWH9 247 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 Q8N2B8 174 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 OR8U1Q8NH10 309 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 FAM110DQ8TAY7 271 aaPredicted RBP12.29□□□□□ -0.44
XRCC1-206ENST00000597811 ACOT12Q8WYK0 555 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 AP3S1Q92572 193 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 ABCG5Q9H222 651 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 GHITMQ9H3K2 345 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 SCOCQ9UIL1 159 aa12.29□□□□□ -0.44
XRCC1-206ENST00000597811 FAM25AB3EWG3 89 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 FAM25CB3EWG5 89 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 FAM25GB3EWG6 89 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 H7C2Y5 167 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 ITGB1BP1O14713 200 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 CSF1P09603 554 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 PTHLHP12272 177 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 SOX6P35712 828 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
XRCC1-206ENST00000597811 LSAMPQ13449 338 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
XRCC1-206ENST00000597811 CENPVQ7Z7K6 275 aaPredicted RBP12.28□□□□□ -0.44
XRCC1-206ENST00000597811 RBMXL1Q96E39 390 aaKnown RBP12.28□□□□□ -0.44
XRCC1-206ENST00000597811 RASL11BQ9BPW5 248 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 ZNF251Q9BRH9 671 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 CABLES2Q9BTV7 478 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 OR2D2Q9H210 308 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
XRCC1-206ENST00000597811 IFT46Q9NQC8 304 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms