RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 C5orf24Q7Z6I8 188 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 FAM89BQ8N5H3 189 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 CT45A3Q8NHU0 189 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
PNKP-202ENST00000593706 LPAR5Q9H1C0 372 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 TAF9BQ9HBM6 251 aa11.49□□□□□ -0.57
PNKP-202ENST00000593706 SHISA3A0PJX4 238 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 DENRO43583 198 aaKnown RBP11.48□□□□□ -0.57
PNKP-202ENST00000593706 MRPS14O60783 128 aaKnown RBP11.48□□□□□ -0.57
PNKP-202ENST00000593706 IGF1P05019 195 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
PNKP-202ENST00000593706 ZNF616Q08AN1 781 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 GNMTQ14749 295 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 P2RY14Q15391 338 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 ZNF880Q6PDB4 577 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 SVOPQ8N4V2 548 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 MUC7Q8TAX7 377 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 OR5B12Q96R08 314 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 GNB4Q9HAV0 340 aa11.48□□□□□ -0.57
PNKP-202ENST00000593706 AK6Q9Y3D8 172 aaKnown RBP11.48□□□□□ -0.57
PNKP-202ENST00000593706 LSAMPQ13449 338 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 HMGN3Q15651 99 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 UBE2UQ5VVX9 321 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 STEAP3Q658P3 488 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 UBE2E2Q96LR5 201 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 RCHY1Q96PM5 261 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 NEDD4LQ96PU5 975 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 FAAP24Q9BTP7 215 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 PARP11Q9NR21 331 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 VSIG4Q9Y279 399 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 RRP15Q9Y3B9 282 aaKnown RBP11.47□□□□□ -0.57
PNKP-202ENST00000593706 WSB1Q9Y6I7 421 aa11.47□□□□□ -0.57
PNKP-202ENST00000593706 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 TRAV1-2A0A0B4J238 106 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 ATP6V0E1O15342 81 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 ARSBP15848 533 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 HTD2P86397 168 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 PLA2G7Q13093 441 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 RAB11BQ15907 218 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 MORN2Q502X0 79 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 ODF3L1Q8IXM7 274 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 MYOZ3Q8TDC0 251 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 CHCHD6Q9BRQ6 235 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 PLGRKTQ9HBL7 147 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 JPT1Q9UK76 154 aa11.46□□□□□ -0.57
PNKP-202ENST00000593706 G3V318 75 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 I3L521 148 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 OVOL1O14753 267 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 SOCS1O15524 211 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 LANCL1O43813 399 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 SAP30O75446 220 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 GALP22466 123 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 BLVRBP30043 206 aaPredicted RBP11.45□□□□□ -0.58
PNKP-202ENST00000593706 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
PNKP-202ENST00000593706 TMEM50BP56557 158 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 CLDN12P56749 244 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ACTBP60709 375 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 GNB1P62873 340 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 CASC10Q5T4H9 136 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ASPHD1Q5U4P2 390 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ZNF429Q86V71 674 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 NR2C2APQ86WQ0 139 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 SPARTQ8N0X7 666 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ZNF491Q8N8L2 437 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 OR52L2PQ8NGH6 319 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 FAM3DQ96BQ1 224 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ZNF251Q9BRH9 671 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 ABHD14AQ9BUJ0 271 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 KLK15Q9H2R5 256 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 OR2S2Q9NQN1 319 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 HSF4Q9ULV5 492 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 V9GY05 133 aa11.45□□□□□ -0.58
PNKP-202ENST00000593706 STARD9Q9P2P6 4700 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 TRDV1A0A1B0GX56 115 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 OR10A3P58181 314 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 RUNX1Q01196 453 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 OVCH2Q7RTZ1 564 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 SBSPONQ8IVN8 264 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 HDHD3Q9BSH5 251 aaPredicted RBP11.44□□□□□ -0.58
PNKP-202ENST00000593706 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 KCNIP1Q9NZI2 227 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 KIAA1456Q9P272 454 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 AK3Q9UIJ7 227 aa11.44□□□□□ -0.58
PNKP-202ENST00000593706 TMEM272A0A1B0GTI8 110 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 NBR2O15453 112 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 YPEL1O60688 119 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 IGLV1-40P01703 118 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 CNTFRP26992 372 aa11.43□□□□□ -0.58
PNKP-202ENST00000593706 PPIFP30405 207 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms