RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZNF736B4DX44 427 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 ITGB1BP1O14713 200 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 FGF16O43320 207 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 WIPF1O43516 503 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 TMEM127O75204 238 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 GSTT2P0CG29 244 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 GSTT2BP0CG30 244 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 SAA2P0DJI9 122 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 CD28P10747 220 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 DTYMKP23919 212 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 RPS19P39019 145 aaKnown RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 LSAMPQ13449 338 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 EBI3Q14213 229 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 PNLIPRP3Q17RR3 467 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 KHDC1LQ5JSQ8 128 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 HACD4Q5VWC8 232 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 SLC35E3Q7Z769 313 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 FOXRED2Q8IWF2 684 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 C5orf56Q8N8D9 126 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 OR5AU1Q8NGC0 362 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 OR4X2Q8NGF9 303 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 OR8H1Q8NGG4 311 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 OR5H6Q8NGV6 325 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 S100A16Q96FQ6 103 aaKnown RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 ABHD14BQ96IU4 210 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 FUNDC2Q9BWH2 189 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 MRPS26Q9BYN8 205 aaKnown RBP8.02□□□□□ -1.13
BRCA1-227ENST00000591849 RDH8Q9NYR8 311 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 KIAA1456Q9P272 454 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 SPATA2Q9UM82 520 aa8.02□□□□□ -1.13
BRCA1-227ENST00000591849 TCRBV4S1A1TA0A5B7 111 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 TMEM235A6NFC5 223 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 H7C2Y5 167 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 OPN1MWP04001 364 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 CTXN2P0C2S0 81 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 OPN1MW2P0DN77 364 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 OPN1MW3P0DN78 364 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 MC5RP33032 325 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 TGFBR1P36897 503 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 VBP1P61758 197 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 SLC35B1P78383 322 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 CBX3Q13185 183 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 PLGLAQ15195 96 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 MMDQ15546 238 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 RPL39P5Q59GN2 51 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 IGSF11Q5DX21 431 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 FAM71F2Q6NXP2 309 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 Q6ZPA2 131 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 ZNF833PQ6ZTB9 187 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 ODF3L1Q8IXM7 274 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 CHPT1Q8WUD6 406 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 NUDCD2Q8WVJ2 157 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 NABP2Q9BQ15 211 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 WNT10AQ9GZT5 417 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 IFI27L2Q9H2X8 130 aa8.01□□□□□ -1.13
BRCA1-227ENST00000591849 A0A0A6YYH2 397 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 IGKV1-6A0A0C4DH72 117 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 SMIM31A0A1B0GVY4 71 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 A0A1W2PRX2 142 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 PSMB11A5LHX3 300 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 A6NJ64 397 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 TRIM64CA6NLI5 447 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 J3QRK9 145 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 M0R1X1 148 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 KCNAB3O43448 404 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 APOA2P02652 100 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 AMY1AP04745 511 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 AMY2AP04746 511 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 OR8U9P0C7N5 309 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 ARPC4P59998 168 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 ACTBP60709 375 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 NCS1P62166 190 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 SRSF7Q16629 238 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-227ENST00000591849 ZNF260Q3ZCT1 412 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 GPR107Q5VW38 600 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 HIST2H2BDQ6DRA6 164 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 FAM131AQ6UXB0 335 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 GLDNQ6ZMI3 551 aaPredicted RBP8□□□□□ -1.13
BRCA1-227ENST00000591849 GPR141Q7Z602 305 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 SAMD12Q8N8I0 201 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 OR13F1Q8NGS4 319 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 OR8U1Q8NH10 309 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 CITED2Q99967 270 aaPredicted RBP8□□□□□ -1.13
BRCA1-227ENST00000591849 PARP12Q9H0J9 701 aaKnown RBP8□□□□□ -1.13
BRCA1-227ENST00000591849 MMP27Q9H306 513 aa8□□□□□ -1.13
BRCA1-227ENST00000591849 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8□□□□□ -1.13
BRCA1-227ENST00000591849 LIN7CQ9NUP9 197 aaKnown RBP8□□□□□ -1.13
BRCA1-227ENST00000591849 ELF5Q9UKW6 265 aaPredicted RBP8□□□□□ -1.13
BRCA1-227ENST00000591849 TRBV6-7A0A0A0MS04 114 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 OR5H14A6NHG9 310 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 DIRAS3O95661 229 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 TFAP2AP05549 437 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 SMIM18P0DKX4 95 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 CT45A6P0DMU7 189 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 CT45A5P0DMU8 189 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 CT45A7P0DMV0 189 aa7.99□□□□□ -1.13
BRCA1-227ENST00000591849 SOX6P35712 828 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms