RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 S100A16Q96FQ6 103 aaKnown RBP9.5□□□□□ -0.89
LIG3-213ENST00000590630 S1PR3Q99500 378 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 CITED1Q99966 193 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 AGMATQ9BSE5 352 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 TOLLIPQ9H0E2 274 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 ELF5Q9UKW6 265 aaPredicted RBP9.5□□□□□ -0.89
LIG3-213ENST00000590630 SIGLEC9Q9Y336 463 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
LIG3-213ENST00000590630 NBEAL1Q6ZS30 2694 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 TRAV18A0A075B6X5 111 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 TRBV6-7A0A0A0MS04 114 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 BET1O15155 118 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 ST8SIA5O15466 376 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 FGF16O43320 207 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 XRCC3O43542 346 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 MOSP00540 346 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 AMY1AP04745 511 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 AMY2AP04746 511 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 GSTT2P0CG29 244 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 GSTT2BP0CG30 244 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 OR3A3P47888 321 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 RORCP51449 518 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 LSAMPQ13449 338 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 IGSF11Q5DX21 431 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
LIG3-213ENST00000590630 SAMD12Q8N8I0 201 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 SGMS2Q8NHU3 365 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 NUDCD2Q8WVJ2 157 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 MAFIPQ8WZ33 124 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
LIG3-213ENST00000590630 NAA50Q9GZZ1 169 aaKnown RBP9.49□□□□□ -0.89
LIG3-213ENST00000590630 PARP12Q9H0J9 701 aaKnown RBP9.49□□□□□ -0.89
LIG3-213ENST00000590630 C11orf54Q9H0W9 315 aaPredicted RBP9.49□□□□□ -0.89
LIG3-213ENST00000590630 SERTAD4Q9NUC0 356 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 RDH8Q9NYR8 311 aa9.49□□□□□ -0.89
LIG3-213ENST00000590630 TET2Q6N021 2002 aaPredicted RBP9.48□□□□□ -0.89
LIG3-213ENST00000590630 PEX14O75381 377 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
LIG3-213ENST00000590630 HNF4GQ14541 408 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 ABCA11PQ4W5N1 156 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 Q8N6K4 173 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 KLHDC1Q8N7A1 406 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 OR8H1Q8NGG4 311 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 AP3S1Q92572 193 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 CMTM3Q96MX0 182 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 NABP2Q9BQ15 211 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 ZNF251Q9BRH9 671 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 GINS4Q9BRT9 223 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 ST6GALNAC5Q9BVH7 336 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 MRPL20Q9BYC9 149 aaKnown RBP9.48□□□□□ -0.89
LIG3-213ENST00000590630 AUNIPQ9H7T9 357 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 ZNF221Q9UK13 617 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 WNK1Q9H4A3 2382 aa9.48□□□□□ -0.89
LIG3-213ENST00000590630 IGKV1D-8A0A087WSZ0 117 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 SSX5O60225 188 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 APOA1P02647 267 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 CTXN2P0C2S0 81 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 VSIG10L2P0DP72 767 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
LIG3-213ENST00000590630 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
LIG3-213ENST00000590630 TMEM69Q5SWH9 247 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 Q6ZS46 218 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.47□□□□□ -0.89
LIG3-213ENST00000590630 RAB2BQ8WUD1 216 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 ABHD14BQ96IU4 210 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 BCL7BQ9BQE9 202 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
LIG3-213ENST00000590630 OR5H14A6NHG9 310 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 NCBP2LA6PVI3 153 aaKnown RBP9.46□□□□□ -0.9
LIG3-213ENST00000590630 ZNF736B4DX44 427 aaPredicted RBP9.46□□□□□ -0.9
LIG3-213ENST00000590630 ZNF182P17025 639 aaPredicted RBP9.46□□□□□ -0.9
LIG3-213ENST00000590630 CBX5P45973 191 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 GPR12P47775 334 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 TMBIM6P55061 237 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 MZT2AQ6P582 158 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 CNIH2Q6PI25 160 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 CLVS1Q8IUQ0 354 aaPredicted RBP9.46□□□□□ -0.9
LIG3-213ENST00000590630 H1FOOQ8IZA3 346 aaPredicted RBP9.46□□□□□ -0.9
LIG3-213ENST00000590630 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 SCOCQ9UIL1 159 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 ANXA10Q9UJ72 324 aa9.46□□□□□ -0.9
LIG3-213ENST00000590630 SMIM31A0A1B0GVY4 71 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 EIF4EP06730 217 aaKnown RBP9.45□□□□□ -0.9
LIG3-213ENST00000590630 OR8U9P0C7N5 309 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 CT45A6P0DMU7 189 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 CT45A5P0DMU8 189 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 CT45A7P0DMV0 189 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 MC5RP33032 325 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 SOX6P35712 828 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 TAS2R20P59543 309 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 TMEM95Q3KNT9 176 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 HOGA1Q86XE5 327 aa9.45□□□□□ -0.9
LIG3-213ENST00000590630 FAM71E2Q8N5Q1 922 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms