RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 FAM58AQ8N1B3 248 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 COMMD1Q8N668 190 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 NEK7Q8TDX7 302 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 FCAMRQ8WWV6 532 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 MRPS24Q96EL2 167 aaKnown RBP6.72□□□□□ -1.33
SDF2-204ENST00000587338 NEDD4LQ96PU5 975 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 THAP7Q9BT49 309 aaPredicted RBP6.72□□□□□ -1.33
SDF2-204ENST00000587338 CCDC32Q9BV29 185 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 CHST6Q9GZX3 395 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 PLEKHJ1Q9NW61 149 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
SDF2-204ENST00000587338 TMEM82A0PJX8 343 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 TMEM235A6NFC5 223 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 RAB27BO00194 218 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 HSPB6O14558 160 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 HLA-DQB1P01920 261 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 RPLP1P05386 114 aaKnown RBP6.71□□□□□ -1.34
SDF2-204ENST00000587338 FAM106CPP0CH98 169 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 IL7P13232 177 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 ZNF44P15621 663 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 MPZP25189 248 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 CEACAM3P40198 252 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 RBM11P57052 281 aaKnown RBP6.71□□□□□ -1.34
SDF2-204ENST00000587338 GNG2P59768 71 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 MRPS15P82914 257 aaKnown RBP6.71□□□□□ -1.34
SDF2-204ENST00000587338 HES1Q14469 280 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 GRK1Q15835 563 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 TPTE2P1Q5T6R2 138 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 CCDC144NLQ6NUI1 221 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 SLC35E3Q7Z769 313 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 RTN4RL2Q86UN3 420 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 FOXRED2Q8IWF2 684 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 Q8IYB0 196 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 OR52I2Q8NH67 350 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 ARHGAP5-AS1Q96IT6 56 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 SNX22Q96L94 193 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 Q96M66 194 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 SDHCQ99643 169 aaPredicted RBP6.71□□□□□ -1.34
SDF2-204ENST00000587338 TM2D1Q9BX74 207 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 PECRQ9BY49 303 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 AUNIPQ9H7T9 357 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 IL36RNQ9UBH0 155 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 GLS2Q9UI32 602 aa6.71□□□□□ -1.34
SDF2-204ENST00000587338 PLECQ15149 4684 aaKnown RBP6.71□□□□□ -1.34
SDF2-204ENST00000587338 UBE2QL1A1L167 161 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 BUB1B-PAK6H3BSN5 160 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 GABARAPH6UMI1 98 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 SIRPB1O00241 398 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 TOR1AO14656 332 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 SH2D1BO14796 132 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 DEGS1O15121 323 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 CTDSPLO15194 276 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 RBBP9O75884 186 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 IGLV1-47P01700 117 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 HIST1H1DP16402 221 aaKnown RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 TMEM11P17152 192 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 TMEM50BP56557 158 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 DEFA1P59665 94 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 DEFA3P59666 94 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ERVK11-1P61568 191 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 MRPS10P82664 201 aaKnown RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 ARL6IP1Q15041 203 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 HLA-DRB5Q30154 266 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 CXorf66Q5JRM2 361 aaPredicted RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 PLAC9Q5JTB6 97 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ELP2Q6IA86 826 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 OR52W1Q6IF63 320 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 TEX38Q6PEX7 206 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 C6orf201Q7Z4U5 140 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 STPG2Q8N412 459 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 TOMM5Q8N4H5 51 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 FAM89BQ8N5H3 189 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 C5orf56Q8N8D9 126 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 POC5Q8NA72 575 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 OR56B4Q8NH76 319 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 SETD6Q8TBK2 473 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 CREB3L1Q96BA8 519 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 FAAP24Q9BTP7 215 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 GAL3ST2Q9H3Q3 398 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ZNF286AQ9HBT8 521 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 CHMP1AQ9HD42 196 aaPredicted RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 IFT46Q9NQC8 304 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ING3Q9NXR8 418 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
SDF2-204ENST00000587338 ELF5Q9UKW6 265 aaPredicted RBP6.7□□□□□ -1.34
SDF2-204ENST00000587338 TRGV10A0A0A0MS01 117 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 MCRIP1C9JLW8 97 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 GSTZ1O43708 216 aaPredicted RBP6.69□□□□□ -1.34
SDF2-204ENST00000587338 LANCL1O43813 399 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 PDCD6O75340 191 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 TPPPO94811 219 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 HAND1O96004 215 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 GSTT2BP0CG30 244 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 FUT3P21217 361 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 GDNFP39905 211 aa6.69□□□□□ -1.34
SDF2-204ENST00000587338 CDX1P47902 265 aaPredicted RBP6.69□□□□□ -1.34
SDF2-204ENST00000587338 P2RX3P56373 397 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms