RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 BRD3OSQ6XYD6 125 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 RTN4RL2Q86UN3 420 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 CMTM1Q8IZ96 169 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 KIR3DL3Q8N743 410 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 UXS1Q8NBZ7 420 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 OR5T2Q8NGG2 359 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 OR52B4Q8NGK2 314 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 OR5D13Q8NGL4 314 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 MRPL30Q8TCC3 161 aaKnown RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 Q8TCH9 128 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 CAPSLQ8WWF8 208 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 MAFIPQ8WZ33 124 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 MRGPRFQ96AM1 343 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 GALNT14Q96FL9 552 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 MEGF10Q96KG7 1140 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 NMES1Q9C002 83 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 DNTTIP1Q9H147 329 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 NCOR1P1Q9H4R4 102 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 MBNL3Q9NUK0 354 aaKnown RBP6.45□□□□□ -1.38
VMP1-204ENST00000587259 TRAPPC2LQ9UL33 140 aa6.45□□□□□ -1.38
VMP1-204ENST00000587259 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 TRAV40A0A0B4J280 105 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 DUXBA0A1W2PPF3 345 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 NKX6-3A6NJ46 265 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 DBX1A6NMT0 343 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 H0YL77 283 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 SIRPB1O00241 398 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 HSPB6O14558 160 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 RGS13O14921 159 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
VMP1-204ENST00000587259 IFNA21P01568 189 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
VMP1-204ENST00000587259 MUC1P15941 1255 aaPredicted RBP6.44□□□□□ -1.38
VMP1-204ENST00000587259 CD80P33681 288 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 PIGPP57054 158 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 HMGN3Q15651 99 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 MSMO1Q15800 293 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 ESCO2Q56NI9 601 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 FAM201AQ5SY85 155 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 PRAMEF6Q5VXH4 476 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 KCTD9Q7L273 389 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 NLRC3Q7RTR2 1065 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 C11orf53Q8IXP5 236 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 ZNF561Q8N587 486 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 TEX29Q8N6K0 151 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 TOMM40LQ969M1 308 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 AKR1E2Q96JD6 320 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 SNX22Q96L94 193 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 ZNF488Q96MN9 340 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 RTBDNQ9BSG5 229 aaPredicted RBP6.44□□□□□ -1.38
VMP1-204ENST00000587259 RSRP1Q9BUV0 290 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 MS4A7Q9GZW8 240 aaPredicted RBP6.44□□□□□ -1.38
VMP1-204ENST00000587259 FXYD6Q9H0Q3 95 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 FAM234AQ9H0X4 552 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 SLC2A9Q9NRM0 540 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 TMEM106BQ9NUM4 274 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 RNF7Q9UBF6 113 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 IL36RNQ9UBH0 155 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 OR14J1Q9UGF5 321 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 HSPB11Q9Y547 144 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 INSIG2Q9Y5U4 225 aa6.44□□□□□ -1.38
VMP1-204ENST00000587259 IGKV1D-8A0A087WSZ0 117 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 TRBV6-7A0A0A0MS04 114 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 RFPL4AA6NLU0 287 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 RFPL4AL1F8VTS6 287 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 GPR31O00270 319 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 MGST3O14880 152 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 HSPA12AO43301 675 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 FOXH1O75593 365 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 TUSC2O75896 110 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 WNT2P09544 360 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 GATA3P23771 443 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 DUSP1P28562 367 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 FXYD4P59646 89 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 ZNF345Q14585 488 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 DEFB112Q30KQ8 113 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 RUSC1-AS1Q66K80 236 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 C17orf107Q6ZR85 190 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 ZNF767PQ75MW2 155 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 MOGAT3Q86VF5 341 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 LGI3Q8N145 548 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 BATF2Q8N1L9 274 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 C9orf62Q8N4C0 152 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 LRTM2Q8N967 370 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 ASCC1Q8N9N2 400 aaKnown RBP6.43□□□□□ -1.38
VMP1-204ENST00000587259 ZBTB34Q8NCN2 500 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 ADAD2Q8NCV1 583 aaKnown RBP6.43□□□□□ -1.38
VMP1-204ENST00000587259 THAP6Q8TBB0 222 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 CASTOR1Q8WTX7 329 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 ITLN1Q8WWA0 313 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 RTN4IP1Q8WWV3 396 aaPredicted RBP6.43□□□□□ -1.38
VMP1-204ENST00000587259 WFDC12Q8WWY7 111 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 DYRK2Q92630 601 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 TMEM230Q96A57 120 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 GALMQ96C23 342 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 SPIN2AQ99865 258 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 SPIN2BQ9BPZ2 258 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 CHIAQ9BZP6 476 aa6.43□□□□□ -1.38
VMP1-204ENST00000587259 PATZ1Q9HBE1 687 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms