RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 RCC1P18754 421 aaPredicted RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 RAB3BP20337 219 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 CHATP28329 748 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 GNMTQ14749 295 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 SLC22A6Q4U2R8 563 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 NHLRC3Q5JS37 347 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 ZNF497Q6ZNH5 498 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 NEK7Q8TDX7 302 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 MRPS24Q96EL2 167 aaKnown RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 RCHY1Q96PM5 261 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 CENPOQ9BU64 300 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 GON7Q9BXV9 100 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 ZNF107Q9UII5 783 aaPredicted RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 MRPS28Q9Y2Q9 187 aaKnown RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 AK6Q9Y3D8 172 aaKnown RBP9.02□□□□□ -0.97
LIG3-207ENST00000586119 HYDINQ4G0P3 5121 aa9.02□□□□□ -0.97
LIG3-207ENST00000586119 NOTOA8MTQ0 251 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 SLC17A2O00624 439 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 SLC22A1O15245 554 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 ATP6V0E1O15342 81 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 HBZP02008 142 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 HTR2CP28335 458 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 SLURP1P55000 103 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 TMBIM6P55061 237 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 GPR107Q5VW38 600 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 AWAT2Q6E213 333 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 CROCCP3Q8IVE0 287 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 C8orf31Q8N9H6 132 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 DLX4Q92988 240 aaPredicted RBP9.01□□□□□ -0.97
LIG3-207ENST00000586119 BANF2Q9H503 90 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 PLGRKTQ9HBL7 147 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 NDUFA13Q9P0J0 144 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 GNG12Q9UBI6 72 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 TRAPPC2LQ9UL33 140 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 SMAD5-AS1Q9Y6J3 95 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 DNAH1Q9P2D7 4330 aa9.01□□□□□ -0.97
LIG3-207ENST00000586119 IGHV7-81A0A0B4J1V7 117 aa9□□□□□ -0.97
LIG3-207ENST00000586119 SHISA3A0PJX4 238 aa9□□□□□ -0.97
LIG3-207ENST00000586119 UBE2QL1A1L167 161 aa9□□□□□ -0.97
LIG3-207ENST00000586119 DPPA5A6NC42 116 aa9□□□□□ -0.97
LIG3-207ENST00000586119 IFITM5A6NNB3 132 aa9□□□□□ -0.97
LIG3-207ENST00000586119 BPNT1O95861 308 aa9□□□□□ -0.97
LIG3-207ENST00000586119 GTF2F2P13984 249 aa9□□□□□ -0.97
LIG3-207ENST00000586119 SPNP16150 400 aa9□□□□□ -0.97
LIG3-207ENST00000586119 IL3RAP26951 378 aa9□□□□□ -0.97
LIG3-207ENST00000586119 SDC2P34741 201 aa9□□□□□ -0.97
LIG3-207ENST00000586119 RAB9AP51151 201 aa9□□□□□ -0.97
LIG3-207ENST00000586119 ZNF137PP52743 207 aa9□□□□□ -0.97
LIG3-207ENST00000586119 LSAMPQ13449 338 aa9□□□□□ -0.97
LIG3-207ENST00000586119 MMDQ15546 238 aa9□□□□□ -0.97
LIG3-207ENST00000586119 RAB11BQ15907 218 aa9□□□□□ -0.97
LIG3-207ENST00000586119 MPV17LQ2QL34 196 aa9□□□□□ -0.97
LIG3-207ENST00000586119 GLIPR1L1Q6UWM5 242 aa9□□□□□ -0.97
LIG3-207ENST00000586119 LINC00596Q86U02 117 aa9□□□□□ -0.97
LIG3-207ENST00000586119 ODF3L1Q8IXM7 274 aa9□□□□□ -0.97
LIG3-207ENST00000586119 RAB2BQ8WUD1 216 aa9□□□□□ -0.97
LIG3-207ENST00000586119 UBE2E2Q96LR5 201 aa9□□□□□ -0.97
LIG3-207ENST00000586119 GFI1Q99684 422 aa9□□□□□ -0.97
LIG3-207ENST00000586119 CST11Q9H112 138 aa9□□□□□ -0.97
LIG3-207ENST00000586119 ETAA1Q9NY74 926 aa9□□□□□ -0.97
LIG3-207ENST00000586119 STEAP1Q9UHE8 339 aa9□□□□□ -0.97
LIG3-207ENST00000586119 VSIG4Q9Y279 399 aa9□□□□□ -0.97
LIG3-207ENST00000586119 FBXO7Q9Y3I1 522 aa9□□□□□ -0.97
LIG3-207ENST00000586119 STARD9Q9P2P6 4700 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 OVOL1O14753 267 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 SOX15O60248 233 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 NOL3O60936 208 aaKnown RBP8.99□□□□□ -0.97
LIG3-207ENST00000586119 IGLV1-40P01703 118 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 FRMD6-AS1P0C7T7 363 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 BLVRBP30043 206 aaPredicted RBP8.99□□□□□ -0.97
LIG3-207ENST00000586119 OR3A3P47888 321 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 SCAND1P57086 179 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 ACTBP60709 375 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 ZNF616Q08AN1 781 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 CTF1Q16619 201 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 MORN2Q502X0 79 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 ZFAND6Q6FIF0 208 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 SIGIRRQ6IA17 410 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 RAB12Q6IQ22 244 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 HAPLN4Q86UW8 402 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 CLVS1Q8IUQ0 354 aaPredicted RBP8.99□□□□□ -0.97
LIG3-207ENST00000586119 OR8H1Q8NGG4 311 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 KCNG3Q8TAE7 436 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 NABP2Q9BQ15 211 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 MRPL20Q9BYC9 149 aaKnown RBP8.99□□□□□ -0.97
LIG3-207ENST00000586119 OR51J1Q9H342 316 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 TAF9BQ9HBM6 251 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 OR2S2Q9NQN1 319 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 PARP11Q9NR21 331 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 RCC2Q9P258 522 aaKnown RBP8.99□□□□□ -0.97
LIG3-207ENST00000586119 PEX16Q9Y5Y5 336 aa8.99□□□□□ -0.97
LIG3-207ENST00000586119 TRAV41A0A0B4J266 112 aa8.98□□□□□ -0.97
LIG3-207ENST00000586119 FAM90A7PA6NKC0 464 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms