RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 PARP12Q9H0J9 701 aaKnown RBP15.91■□□□□ 0.14
TOP3A-219ENST00000584887 FBXL15Q9H469 300 aa15.91■□□□□ 0.14
TOP3A-219ENST00000584887 SCN3BQ9NY72 215 aa15.91■□□□□ 0.14
TOP3A-219ENST00000584887 SLC23A1Q9UHI7 598 aa15.91■□□□□ 0.14
TOP3A-219ENST00000584887 NBEAL2Q6ZNJ1 2754 aa15.91■□□□□ 0.14
TOP3A-219ENST00000584887 RAB29O14966 203 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 SLC22A1O15245 554 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 BPNT1O95861 308 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 PPIFP30405 207 aaKnown RBP15.9■□□□□ 0.14
TOP3A-219ENST00000584887 GNB1P62873 340 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 ZNF616Q08AN1 781 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 LIPKQ5VXJ0 399 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 NPBQ8NG41 125 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 OR6M1Q8NGM8 313 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 UFD1Q92890 307 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 HDHD3Q9BSH5 251 aaPredicted RBP15.9■□□□□ 0.14
TOP3A-219ENST00000584887 PLGRKTQ9HBL7 147 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 PIPOXQ9P0Z9 390 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 SCOCQ9UIL1 159 aa15.9■□□□□ 0.14
TOP3A-219ENST00000584887 LSM2Q9Y333 95 aaKnown RBP15.9■□□□□ 0.14
TOP3A-219ENST00000584887 A0A0A6YYD4 124 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 TMEM14DPA8MWL7 114 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 ANKRD65E5RJM6 399 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 H7C2Y5 167 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 HSPA12AO43301 675 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 NAPSAO96009 420 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 GSTP1P09211 210 aaKnown RBP15.89■□□□□ 0.13
TOP3A-219ENST00000584887 UCHL1P09936 223 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 HSMCR30P0CW71 290 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 NDPQ00604 133 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 RNLSQ5VYX0 342 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 FAM71F2Q6NXP2 309 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 ABHD14BQ96IU4 210 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 URM1Q9BTM9 101 aaKnown RBP15.89■□□□□ 0.13
TOP3A-219ENST00000584887 AK3Q9UIJ7 227 aa15.89■□□□□ 0.13
TOP3A-219ENST00000584887 A0A1W2PN81 502 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 I3L521 148 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 RRHO14718 337 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 SOCS1O15524 211 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 NDUFA3O95167 84 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 IGLV1-40P01703 118 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 CHRNA7P36544 502 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 RAB9AP51151 201 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 QRFPP83859 136 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 KIAA0141Q14154 515 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-219ENST00000584887 ASPHD1Q5U4P2 390 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 ZNF880Q6PDB4 577 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 CASTOR1Q8WTX7 329 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 ASCL2Q99929 193 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 ALX4Q9H161 411 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-219ENST00000584887 OR1A1Q9P1Q5 309 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 ZNF256Q9Y2P7 627 aaPredicted RBP15.88■□□□□ 0.13
TOP3A-219ENST00000584887 FBXO7Q9Y3I1 522 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 LSM4Q9Y4Z0 139 aaKnown RBP15.88■□□□□ 0.13
TOP3A-219ENST00000584887 U3KQK5 164 aa15.88■□□□□ 0.13
TOP3A-219ENST00000584887 SORL1Q92673 2214 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 TENM3Q9P273 2699 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 OR5H14A6NHG9 310 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 CT45A6P0DMU7 189 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 CT45A5P0DMU8 189 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 CT45A7P0DMV0 189 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 ARSBP15848 533 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 RPS25P62851 125 aaKnown RBP15.87■□□□□ 0.13
TOP3A-219ENST00000584887 HLA-DRB3P79483 266 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 RAB11BQ15907 218 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 CLCC1Q96S66 551 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 LPAR5Q9H1C0 372 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 RIMS4Q9H426 269 aaPredicted RBP15.87■□□□□ 0.13
TOP3A-219ENST00000584887 FOXA2Q9Y261 457 aaPredicted RBP15.87■□□□□ 0.13
TOP3A-219ENST00000584887 WASHC3Q9Y3C0 194 aa15.87■□□□□ 0.13
TOP3A-219ENST00000584887 H0YJW9 148 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 NHLRC4P0CG21 123 aaPredicted RBP15.86■□□□□ 0.13
TOP3A-219ENST00000584887 CEACAM6P40199 344 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 CX3CL1P78423 397 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 RUNX1Q01196 453 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 ZNF660Q6AZW8 331 aaPredicted RBP15.86■□□□□ 0.13
TOP3A-219ENST00000584887 MINDY2Q8NBR6 621 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 DCUN1D4Q92564 292 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 C11orf54Q9H0W9 315 aaPredicted RBP15.86■□□□□ 0.13
TOP3A-219ENST00000584887 ISYNA1Q9NPH2 558 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 RNF150Q9ULK6 438 aa15.86■□□□□ 0.13
TOP3A-219ENST00000584887 AK6Q9Y3D8 172 aaKnown RBP15.86■□□□□ 0.13
TOP3A-219ENST00000584887 FCN1O00602 326 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 SLC17A2O00624 439 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 OVOL1O14753 267 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 ZBTB25P24278 435 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 MC5RP33032 325 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 AQP4P55087 323 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 IRF3Q14653 427 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 DRAXINQ8NBI3 349 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-219ENST00000584887 EDARADDQ8WWZ3 215 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 GFI1Q99684 422 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 CCDC90BQ9GZT6 254 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 C12orf4Q9NQ89 552 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 NKX1-2Q9UD57 310 aaPredicted RBP15.85■□□□□ 0.13
TOP3A-219ENST00000584887 GAB2Q9UQC2 676 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 TPRKBQ9Y3C4 175 aa15.85■□□□□ 0.13
TOP3A-219ENST00000584887 TRBV6-6A0A0A6YYG2 114 aa15.84■□□□□ 0.13
TOP3A-219ENST00000584887 SOX15O60248 233 aa15.84■□□□□ 0.13
TOP3A-219ENST00000584887 CPEP16870 476 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms