RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 PPP5D1E7EU14 171 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 F6UZH7 168 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 SMKR1H3BMG3 65 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GABARAPH6UMI1 98 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 CYB5BO43169 146 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 BRI3O95415 125 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 KLK1P06870 262 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GIMD1P0DJR0 217 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 VDAC2P45880 294 aaPredicted RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 GPR6P46095 362 aaPredicted RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 FGF8P55075 233 aaPredicted RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 UCNP55089 124 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 H2BFSP57053 126 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TAS2R19P59542 299 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ZNF92Q03936 586 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ACVR1Q04771 509 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ZNF763Q0D2J5 394 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GINS1Q14691 196 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 PAFAH1B3Q15102 231 aaKnown RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 SLC9A3R2Q15599 337 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 VAMP3Q15836 100 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 PSG3Q16557 428 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 PGGHGQ32M88 737 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GFI1BQ5VTD9 330 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 KHDRBS2Q5VWX1 349 aaKnown RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 SYPL2Q5VXT5 272 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 OR2T2Q6IF00 324 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 C11orf71Q6IPW1 123 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 SFXN4Q6P4A7 337 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 WDR74Q6RFH5 385 aaPredicted RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 FBXW12Q6X9E4 464 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 FAM220AQ7Z4H9 259 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 LINC01551Q86U37 167 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ZNF329Q86UD4 541 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TMEM183AQ8IXX5 376 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ZFP41Q8N8Y5 198 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 NOXO1Q8NFA2 376 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 OR4K5Q8NGD3 323 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 EEF1AKMT1Q8WVE0 214 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TNFAIP8L1Q8WVP5 186 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 FAM151AQ8WW52 585 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GHSRQ92847 366 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 MUCL1Q96DR8 90 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 OR52E6Q96RD3 313 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 NIPSNAP1Q9BPW8 284 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 MICU1Q9BPX6 476 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 FAAP24Q9BTP7 215 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 DOHHQ9BU89 302 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TBL1XR1Q9BZK7 514 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 OR2J1Q9GZK6 312 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ARV1Q9H2C2 271 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 CLMPQ9H6B4 373 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 GNB4Q9HAV0 340 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 KCNJ16Q9NPI9 418 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TMEM9BQ9NQ34 198 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 PARP11Q9NR21 331 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 CISHQ9NSE2 258 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 TREX1Q9NSU2 369 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 CBLN4Q9NTU7 201 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 DDIT4Q9NX09 232 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 IL17CQ9P0M4 197 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 VAX2Q9UIW0 290 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 NAGKQ9UJ70 344 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 ZNF223Q9UK11 482 aaPredicted RBP3.72□□□□□ -1.81
SS18-223ENST00000583595 HDGFL3Q9Y3E1 203 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 PRSS21Q9Y6M0 314 aa3.72□□□□□ -1.81
SS18-223ENST00000583595 DSPPQ9NZW4 1301 aa3.71□□□□□ -1.81
SS18-223ENST00000583595 THSD7BQ9C0I4 1608 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 A0A0G2JN53 185 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 A0A1B0GV72 72 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 A0A1W2PRF3 423 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 A0A1W2PRM7 423 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 TMEM235A6NFC5 223 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 OR5H14A6NHG9 310 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 C12orf77C9JDV5 145 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 K7ERU9 68 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 M0R129 80 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 CCL25O15444 150 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 SNAI2O43623 268 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 CDC40O60508 579 aaKnown RBP eCLIP3.71□□□□□ -1.82
SS18-223ENST00000583595 MPDU1O75352 247 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 TBX6O95947 436 aaPredicted RBP3.71□□□□□ -1.82
SS18-223ENST00000583595 CSNK2A2P19784 350 aaPredicted RBP3.71□□□□□ -1.82
SS18-223ENST00000583595 PPIBP23284 216 aaKnown RBP3.71□□□□□ -1.82
SS18-223ENST00000583595 OR10J1P30954 320 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 GNRHRP30968 328 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 S100A3P33764 101 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 APLNRP35414 380 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 SUB1P53999 127 aaKnown RBP eCLIP3.71□□□□□ -1.82
SS18-223ENST00000583595 CSNK1G2P78368 415 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 CXCL6P80162 114 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 H3F3AP84243 136 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 ZNF235Q14590 738 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 PRR4Q16378 134 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 TNXAQ16473 311 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 QRICH1Q2TAL8 776 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 BSXQ3C1V8 233 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 KRTAP27-1Q3LI81 207 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 LINC00303Q3SY05 128 aa3.71□□□□□ -1.82
SS18-223ENST00000583595 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms