RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 LHFPL1Q86WI0 220 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 TOMM5Q8N4H5 51 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 OR10X1Q8NGY0 326 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 OR6F1Q8NGZ6 308 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 CT45A3Q8NHU0 189 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 UBALD1Q8TB05 177 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 ST6GALNAC6Q969X2 333 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 C7orf50Q9BRJ6 194 aaKnown RBP8.44□□□□□ -1.06
CCDC47-203ENST00000580986 EHFQ9NZC4 300 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 DPM3Q9P2X0 92 aa8.44□□□□□ -1.06
CCDC47-203ENST00000580986 VGLL3A8MV65 326 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 RAB29O14966 203 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 RAB3DO95716 219 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 PPYP01298 95 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 IFNA6P05013 189 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 FBP1P09467 338 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 EPHA1P21709 976 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 RFX2P48378 723 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 DYNLT3P51808 116 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 LUMP51884 338 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-203ENST00000580986 ARHGDIBP52566 201 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 UCP3P55916 312 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 DLX1P56177 255 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 HABP2Q14520 560 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-203ENST00000580986 BAK1Q16611 211 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 LTC4SQ16873 150 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 C5orf24Q7Z6I8 188 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 LDLRAD3Q86YD5 345 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 ODF3L1Q8IXM7 274 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 OR8H3Q8N146 312 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 OR10V1Q8NGI7 309 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 AJUBAQ96IF1 538 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 PRRT1Q99946 306 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 BEX2Q9BXY8 128 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 MS4A7Q9GZW8 240 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-203ENST00000580986 C11orf54Q9H0W9 315 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-203ENST00000580986 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
CCDC47-203ENST00000580986 GSX1Q9H4S2 264 aaPredicted RBP8.43□□□□□ -1.06
CCDC47-203ENST00000580986 ANK3Q12955 4377 aaKnown RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 MXRA5Q9NR99 2828 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 NAP1L6A6NFF2 107 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 SLC31A2O15432 143 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 CRLF1O75462 422 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 UPK1BO75841 260 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 PMP2P02689 132 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 FCER2P06734 321 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 FAM157CP0CG43 387 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 SRD5A1P18405 259 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 NFYAP23511 347 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 FCGR2CP31995 323 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 SRP14P37108 136 aaKnown RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 GNG10P50151 68 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 TSPAN5P62079 268 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 SURF2Q15527 256 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 RNASE12Q5GAN4 147 aaKnown RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 UTF1Q5T230 341 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 TPTE2P1Q5T6R2 138 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 LPCAT3Q6P1A2 487 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF833PQ6ZTB9 187 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF645Q8N7E2 425 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 ZBTB34Q8NCN2 500 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 OR4C16Q8NGL9 310 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 LEAP2Q969E1 77 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 TSC22D3Q99576 134 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF251Q9BRH9 671 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 TINAGL1Q9GZM7 467 aaPredicted RBP8.42□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF221Q9UK13 617 aa8.42□□□□□ -1.06
CCDC47-203ENST00000580986 SAA2-SAA4A0A096LPE2 208 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 FAM172BPA6NC97 362 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 DISC1C4P0D8 188 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 INAFM1C9JVW0 142 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 GAPDHP04406 335 aaKnown RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 AMY2AP04746 511 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF735P0CB33 412 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 SAA2P0DJI9 122 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 AADACP22760 399 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 INPP1P49441 399 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 HERV-K104P61576 105 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 LDLRAD2Q5SZI1 272 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 AADACL3Q5VUY0 350 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 OR4D10Q8NGI6 311 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 TERB2Q8NHR7 220 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 RPEQ96AT9 228 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF486Q96H40 463 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 AKR1E2Q96JD6 320 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 S1PR3Q99500 378 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 SLC6A7Q99884 636 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF2Q9BSG1 426 aaPredicted RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 PARP12Q9H0J9 701 aaKnown RBP8.41□□□□□ -1.06
CCDC47-203ENST00000580986 OR2D2Q9H210 308 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 HRASLSQ9HDD0 168 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 ZNRD1Q9P1U0 126 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 SCP2D1Q9UJQ7 156 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 FAM96BQ9Y3D0 163 aa8.41□□□□□ -1.06
CCDC47-203ENST00000580986 SONP18583 2426 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms