RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ZNF260Q3ZCT1 412 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
MKS1-207ENST00000578789 HACD4Q5VWC8 232 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 ZNF251Q9BRH9 671 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 AGMATQ9BSE5 352 aa11.49□□□□□ -0.57
MKS1-207ENST00000578789 MRPL20Q9BYC9 149 aaKnown RBP11.49□□□□□ -0.57
MKS1-207ENST00000578789 A0A0A6YYH2 397 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 A6NJ64 397 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 SH2D7A6NKC9 451 aaPredicted RBP11.48□□□□□ -0.57
MKS1-207ENST00000578789 M0QZ24 198 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 RAB29O14966 203 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 HSPA12AO43301 675 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 CEACAM6P40199 344 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 OR3A3P47888 321 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 HNF4GQ14541 408 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 PNLIPRP3Q17RR3 467 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 OR8H1Q8NGG4 311 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 MAFIPQ8WZ33 124 aa11.48□□□□□ -0.57
MKS1-207ENST00000578789 MRPS26Q9BYN8 205 aaKnown RBP11.48□□□□□ -0.57
MKS1-207ENST00000578789 C11orf54Q9H0W9 315 aaPredicted RBP11.48□□□□□ -0.57
MKS1-207ENST00000578789 ZNF230Q9UIE0 474 aaPredicted RBP11.48□□□□□ -0.57
MKS1-207ENST00000578789 ELF5Q9UKW6 265 aaPredicted RBP11.48□□□□□ -0.57
MKS1-207ENST00000578789 TRBV6-7A0A0A0MS04 114 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 TMEM235A6NFC5 223 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 FBXO24O75426 580 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 GABARAPO95166 117 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 GSTT2P0CG29 244 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 GSTT2BP0CG30 244 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 TALDO1P37837 337 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 NCS1P62166 190 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 PITPNAQ00169 270 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 Q8N9W7 124 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 SLC25A46Q96AG3 418 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 S1PR3Q99500 378 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 DCSTAMPQ9H295 470 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 PLSCR3Q9NRY6 295 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
MKS1-207ENST00000578789 RDH8Q9NYR8 311 aa11.47□□□□□ -0.57
MKS1-207ENST00000578789 TRRAPQ9Y4A5 3859 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 IGKV1D-8A0A087WSZ0 117 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 PEX14O75381 377 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 ALDH3B2P48448 385 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 GNG2P59768 71 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 C2orf68Q2NKX9 166 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 RPL39P5Q59GN2 51 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 TREML4Q6UXN2 200 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 ANKRD13BQ86YJ7 626 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 FAM71E2Q8N5Q1 922 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 NUDCD2Q8WVJ2 157 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 PHF21AQ96BD5 680 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 ABHD14BQ96IU4 210 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 ABCG5Q9H222 651 aa11.46□□□□□ -0.57
MKS1-207ENST00000578789 BET1O15155 118 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 SSX5O60225 188 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 IGHG2P01859 326 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 CT45A6P0DMU7 189 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 CT45A5P0DMU8 189 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 CT45A7P0DMV0 189 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 CD28P10747 220 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 VBP1P61758 197 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 C9orf152Q5JTZ5 239 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.45□□□□□ -0.58
MKS1-207ENST00000578789 OR10J5Q8NHC4 309 aa11.45□□□□□ -0.58
MKS1-207ENST00000578789 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
MKS1-207ENST00000578789 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 OR5H14A6NHG9 310 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 NCBP2LA6PVI3 153 aaKnown RBP11.44□□□□□ -0.58
MKS1-207ENST00000578789 PROP1O75360 226 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 TSPAN15O95858 294 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 TFAP2AP05549 437 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 GPR12P47775 334 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 F2RL1P55085 397 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 CTF1Q16619 201 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 UBE2NLQ5JXB2 153 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 H1FOOQ8IZA3 346 aaPredicted RBP11.44□□□□□ -0.58
MKS1-207ENST00000578789 C11orf44Q8N8P7 122 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
MKS1-207ENST00000578789 NAA50Q9GZZ1 169 aaKnown RBP11.44□□□□□ -0.58
MKS1-207ENST00000578789 MMP27Q9H306 513 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 ZNF221Q9UK13 617 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 GAB2Q9UQC2 676 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 MGAM2Q2M2H8 2515 aa11.44□□□□□ -0.58
MKS1-207ENST00000578789 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 PKD1L1Q8TDX9 2849 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 H0YJW9 148 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 CSF1P09603 554 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 ACTBP60709 375 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 MMDQ15546 238 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 CNIH2Q6PI25 160 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 SLC35E3Q7Z769 313 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 NDUFA11Q86Y39 141 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 OR5AU1Q8NGC0 362 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 GINS4Q9BRT9 223 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 ST6GALNAC5Q9BVH7 336 aa11.43□□□□□ -0.58
MKS1-207ENST00000578789 AUNIPQ9H7T9 357 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms