RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ODF3L1Q8IXM7 274 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 MRAPQ8TCY5 172 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 NABP2Q9BQ15 211 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 PECRQ9BY49 303 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 GPR61Q9BZJ8 451 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 GHITMQ9H3K2 345 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 NOTCH1P46531 2555 aa12.22□□□□□ -0.45
SF3B3-215ENST00000577085 TMEM272A0A1B0GTI8 110 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 H7C2Y5 167 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 NBR2O15453 112 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 RAB3BP20337 219 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 PSMB9P28065 219 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 RAB25P57735 213 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 PLGLAQ15195 96 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 RBMXL1Q96E39 390 aaKnown RBP12.21□□□□□ -0.45
SF3B3-215ENST00000577085 HSPB9Q9BQS6 159 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 Q9N2K0 584 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 ZNF221Q9UK13 617 aa12.21□□□□□ -0.45
SF3B3-215ENST00000577085 A0A075B6Q4 140 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 METTL21EPA6NDL7 271 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 IFITM5A6NNB3 132 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 RPLP1P05386 114 aaKnown RBP12.2□□□□□ -0.46
SF3B3-215ENST00000577085 GSTP1P09211 210 aaKnown RBP12.2□□□□□ -0.46
SF3B3-215ENST00000577085 MC5RP33032 325 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 MYCNOSP40205 109 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 THBS3P49746 956 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 OR10A3P58181 314 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 FOXE3Q13461 319 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 C22orf42Q6IC83 251 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 LIN54Q6MZP7 749 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 TMEM65Q6PI78 240 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 FAM131AQ6UXB0 335 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 MRPL41Q8IXM3 137 aaKnown RBP12.2□□□□□ -0.46
SF3B3-215ENST00000577085 FCGR1BQ92637 280 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 ABHD14BQ96IU4 210 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
SF3B3-215ENST00000577085 PARP11Q9NR21 331 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 OR1A1Q9P1Q5 309 aa12.2□□□□□ -0.46
SF3B3-215ENST00000577085 OR5H14A6NHG9 310 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 TRDCB7Z8K6 153 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 ITGB1BP1O14713 200 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 IGF1P05019 195 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 ELANEP08246 267 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 SCTP09683 121 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 GALP22466 123 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 TALDO1P37837 337 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 SERPINB10P48595 397 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 TMEM50BP56557 158 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 PLAC9Q5JTB6 97 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 CD200R1LQ6Q8B3 271 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 Q6ZPA2 131 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 LINC00482Q8N8I6 264 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 OR8U1Q8NH10 309 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 KCTD7Q96MP8 289 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 CHCHD6Q9BRQ6 235 aa12.19□□□□□ -0.46
SF3B3-215ENST00000577085 AURKAIP1Q9NWT8 199 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-215ENST00000577085 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-215ENST00000577085 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 RAB6AP20340 208 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 CNTFRP26992 372 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 KIR2DS1Q14954 304 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 C5orf64Q2M2E5 130 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 UBE2UQ5VVX9 321 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 C18orf65Q6ZTR6 163 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 ABHD5Q8WTS1 349 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 RITA1Q96K30 269 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 C11orf54Q9H0W9 315 aaPredicted RBP12.18□□□□□ -0.46
SF3B3-215ENST00000577085 OR51J1Q9H342 316 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 RNF150Q9ULK6 438 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
SF3B3-215ENST00000577085 CCL24O00175 119 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 BET1O15155 118 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 IGHG4P01861 327 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 CT45A6P0DMU7 189 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 CT45A5P0DMU8 189 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 CT45A7P0DMV0 189 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 GNB3P16520 340 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-215ENST00000577085 GLDNQ6ZMI3 551 aaPredicted RBP12.17□□□□□ -0.46
SF3B3-215ENST00000577085 ETV3LQ6ZN32 361 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 LCNL1Q6ZST4 164 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 NPBQ8NG41 125 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 OR4A4PQ8NGN8 299 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 YTHDF1Q9BYJ9 559 aaKnown RBP12.17□□□□□ -0.46
SF3B3-215ENST00000577085 PARP12Q9H0J9 701 aaKnown RBP12.17□□□□□ -0.46
SF3B3-215ENST00000577085 ATG5Q9H1Y0 275 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 RDH8Q9NYR8 311 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
SF3B3-215ENST00000577085 SSR3Q9UNL2 185 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms