RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 IFI27L2Q9H2X8 130 aa12.13□□□□□ -0.47
SMG6-220ENST00000576218 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
SMG6-220ENST00000576218 PSMB11A5LHX3 300 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 RAB27BO00194 218 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 MFNGO00587 321 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 AMY1AP04745 511 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 AMY2AP04746 511 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 CLEC2LP0C7M8 214 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 GPR12P47775 334 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 SERPINB10P48595 397 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 GNG2P59768 71 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 LSM3P62310 102 aaKnown RBP12.12□□□□□ -0.47
SMG6-220ENST00000576218 SLC35B1P78383 322 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 EBI3Q14213 229 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 OR4F17Q8NGA8 305 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 CHPT1Q8WUD6 406 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 ABHD14BQ96IU4 210 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 OR4F4Q96R69 305 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 GHITMQ9H3K2 345 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 LIN7CQ9NUP9 197 aaKnown RBP12.12□□□□□ -0.47
SMG6-220ENST00000576218 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
SMG6-220ENST00000576218 H7C2Y5 167 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 KCNAB3O43448 404 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
SMG6-220ENST00000576218 PF4V1P10720 104 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 RPL39P5Q59GN2 51 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 NABP2Q9BQ15 211 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 RHBDL2Q9NX52 303 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 RDH8Q9NYR8 311 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
SMG6-220ENST00000576218 RNF150Q9ULK6 438 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 ETV7Q9Y603 341 aa12.11□□□□□ -0.47
SMG6-220ENST00000576218 SOX6P35712 828 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 ACTBP60709 375 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 PLGLAQ15195 96 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 FAM131AQ6UXB0 335 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 CROCCP3Q8IVE0 287 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 Q8N6K4 173 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 Q8N9W7 124 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 NOL4LQ96MY1 436 aaPredicted RBP12.1□□□□□ -0.47
SMG6-220ENST00000576218 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
SMG6-220ENST00000576218 C11orf54Q9H0W9 315 aaPredicted RBP12.1□□□□□ -0.47
SMG6-220ENST00000576218 LINC00527Q9UJ94 153 aa12.1□□□□□ -0.47
SMG6-220ENST00000576218 TSSC4Q9Y5U2 329 aaPredicted RBP12.1□□□□□ -0.47
SMG6-220ENST00000576218 PKD1L1Q8TDX9 2849 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 OR5H14A6NHG9 310 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 AP4M1O00189 453 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 ITGB1BP1O14713 200 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 GSTP1P09211 210 aaKnown RBP12.09□□□□□ -0.47
SMG6-220ENST00000576218 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 GSTT2BP0CG30 244 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 SCAND1P57086 179 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 PITPNAQ00169 270 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 HACD4Q5VWC8 232 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 GLDNQ6ZMI3 551 aaPredicted RBP12.09□□□□□ -0.47
SMG6-220ENST00000576218 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 NUDCD2Q8WVJ2 157 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 ABCG5Q9H222 651 aa12.09□□□□□ -0.47
SMG6-220ENST00000576218 WNK1Q9H4A3 2382 aa12.08□□□□□ -0.47
SMG6-220ENST00000576218 NBR2O15453 112 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 IGHG2P01859 326 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 APOA2P02652 100 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 PF4P02776 101 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 DTYMKP23919 212 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 MC5RP33032 325 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 F2RL1P55085 397 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 CBX3Q13185 183 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 IGSF11Q5DX21 431 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 STPG2Q8N412 459 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 RBMXL1Q96E39 390 aaKnown RBP12.08□□□□□ -0.48
SMG6-220ENST00000576218 YIPF6Q96EC8 236 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 CABLES2Q9BTV7 478 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 OR2D2Q9H210 308 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 DIABLOQ9NR28 239 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
SMG6-220ENST00000576218 WASHC3Q9Y3C0 194 aa12.08□□□□□ -0.48
SMG6-220ENST00000576218 TRAV18A0A075B6X5 111 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 IGKV1-6A0A0C4DH72 117 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 M0R1X1 148 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 TMEM127O75204 238 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 TFAP2AP05549 437 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 VDAC1P21796 283 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 TGFBR1P36897 503 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 DRAXINQ8NBI3 349 aaPredicted RBP12.07□□□□□ -0.48
SMG6-220ENST00000576218 OR5H6Q8NGV6 325 aa12.07□□□□□ -0.48
SMG6-220ENST00000576218 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms