RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 OR4F17Q8NGA8 305 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 CHPT1Q8WUD6 406 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 R3HDM4Q96D70 268 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 OR4F4Q96R69 305 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 C11orf54Q9H0W9 315 aaPredicted RBP12.74□□□□□ -0.37
NDE1-205ENST00000572756 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 PIPOXQ9P0Z9 390 aa12.74□□□□□ -0.37
NDE1-205ENST00000572756 TSSC4Q9Y5U2 329 aaPredicted RBP12.74□□□□□ -0.37
NDE1-205ENST00000572756 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 CD3GP09693 182 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 CD36P16671 472 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 CEACAM6P40199 344 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 SFXN4Q6P4A7 337 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 ZNF329Q86UD4 541 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 STPG2Q8N412 459 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 EDARADDQ8WWZ3 215 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 KCTD7Q96MP8 289 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 CHCHD6Q9BRQ6 235 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 TOLLIPQ9H0E2 274 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 GHITMQ9H3K2 345 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
NDE1-205ENST00000572756 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
NDE1-205ENST00000572756 A0A1W2PRX2 142 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 PROP1O75360 226 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CLEC2LP0C7M8 214 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CT45A6P0DMU7 189 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CT45A5P0DMU8 189 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CT45A7P0DMV0 189 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 RPL39P5Q59GN2 51 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 FOXRED2Q8IWF2 684 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 OR4A4PQ8NGN8 299 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 RITA1Q96K30 269 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 RASL11BQ9BPW5 248 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 HSPB9Q9BQS6 159 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CABLES2Q9BTV7 478 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 CENPOQ9BU64 300 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 DAPK2Q9UIK4 370 aa12.72□□□□□ -0.37
NDE1-205ENST00000572756 AP4M1O00189 453 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 FABP7O15540 132 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 HSPA12AO43301 675 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 DIRAS3O95661 229 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 SNRPBP14678 240 aaKnown RBP12.71□□□□□ -0.37
NDE1-205ENST00000572756 CNTFRP26992 372 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 ACTBP60709 375 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 MRPS15P82914 257 aaKnown RBP12.71□□□□□ -0.37
NDE1-205ENST00000572756 MMDQ15546 238 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 SRSF7Q16629 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
NDE1-205ENST00000572756 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 Q6ZS49 121 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 C1QL4Q86Z23 238 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 ATG5Q9H1Y0 275 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 RDH8Q9NYR8 311 aa12.71□□□□□ -0.37
NDE1-205ENST00000572756 ELF5Q9UKW6 265 aaPredicted RBP12.71□□□□□ -0.37
NDE1-205ENST00000572756 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.38
NDE1-205ENST00000572756 A0A075B6Q4 140 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 LOC100506127A0A0U1RQW1 187 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 G3V4G9 280 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 H0YJW9 148 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 NDUFA3O95167 84 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 GSTT2P0CG29 244 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 GSTT2BP0CG30 244 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 SOX6P35712 828 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 SERPINB10P48595 397 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 KIR2DS1Q14954 304 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 IGSF11Q5DX21 431 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 FAM131AQ6UXB0 335 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 NPBQ8NG41 125 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 OR5AN1Q8NGI8 311 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 LGALS14Q8TCE9 139 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 ZNF230Q9UIE0 474 aaPredicted RBP12.7□□□□□ -0.38
NDE1-205ENST00000572756 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
NDE1-205ENST00000572756 A0A087WXM4 84 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 TRBV6-7A0A0A0MS04 114 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 OR5H14A6NHG9 310 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 SCAND1P57086 179 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 SLC35B1P78383 322 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 CFHR3Q02985 330 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 MXD1Q05195 221 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 ARL6IP1Q15041 203 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 CDNFQ49AH0 187 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 PDLIM3Q53GG5 364 aaPredicted RBP12.69□□□□□ -0.38
NDE1-205ENST00000572756 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
NDE1-205ENST00000572756 GLDNQ6ZMI3 551 aaPredicted RBP12.69□□□□□ -0.38
NDE1-205ENST00000572756 COMMD1Q8N668 190 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 TSPAN14Q8NG11 270 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 MAFIPQ8WZ33 124 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 YIPF6Q96EC8 236 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 DNAH3Q8TD57 4116 aa12.69□□□□□ -0.38
NDE1-205ENST00000572756 IGKV1D-8A0A087WSZ0 117 aa12.68□□□□□ -0.38
NDE1-205ENST00000572756 BET1O15155 118 aa12.68□□□□□ -0.38
NDE1-205ENST00000572756 NBR2O15453 112 aa12.68□□□□□ -0.38
NDE1-205ENST00000572756 SCGNO76038 276 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms