RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 RAB3CQ96E17 227 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 TXNL4BQ9NX01 149 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 PIPOXQ9P0Z9 390 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 RNF150Q9ULK6 438 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 KCNK7Q9Y2U2 307 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 MEGF8Q7Z7M0 2845 aa14.01□□□□□ -0.17
CTDNEP1-207ENST00000572043 PKD1L1Q8TDX9 2849 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 CD3GP09693 182 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 SOX6P35712 828 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 RANBP1P43487 201 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 RPL23AP62750 156 aaKnown RBP14□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF773Q6PK81 442 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 LCNL1Q6ZST4 164 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 YTHDF1Q9BYJ9 559 aaKnown RBP14□□□□□ -0.17
CTDNEP1-207ENST00000572043 C11orf54Q9H0W9 315 aaPredicted RBP14□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF107Q9UII5 783 aaPredicted RBP14□□□□□ -0.17
CTDNEP1-207ENST00000572043 MGAT4AQ9UM21 535 aa14□□□□□ -0.17
CTDNEP1-207ENST00000572043 WNK1Q9H4A3 2382 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 IGKV1-6A0A0C4DH72 117 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 TRDCB7Z8K6 153 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 RAB29O14966 203 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 GALP22466 123 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 FAM131AQ6UXB0 335 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 C8orf86Q6ZUL3 223 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 KLHL30-AS1Q8NEE0 82 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 OR10R2Q8NGX6 335 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 MAFIPQ8WZ33 124 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 PHF21AQ96BD5 680 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 ATG5Q9H1Y0 275 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 OR51E2Q9H255 320 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 STUB1Q9UNE7 303 aa13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 RRP15Q9Y3B9 282 aaKnown RBP13.99□□□□□ -0.17
CTDNEP1-207ENST00000572043 RRP9O43818 475 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 RPLP1P05386 114 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 CT45A6P0DMU7 189 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 CT45A5P0DMU8 189 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 CT45A7P0DMV0 189 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 VDAC1P21796 283 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 GADD45AP24522 165 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 NEDD8Q15843 81 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 KPRPQ5T749 579 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 TEX38Q6PEX7 206 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 DRAXINQ8NBI3 349 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 DUX3Q96PT4 197 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF230Q9UIE0 474 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 SSR3Q9UNL2 185 aa13.98□□□□□ -0.17
CTDNEP1-207ENST00000572043 RAB27BO00194 218 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 MFNGO00587 321 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 BET1O15155 118 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 NBR2O15453 112 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 FABP7O15540 132 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 FCGR3AP08637 254 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 RAB6AP20340 208 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 PNLIPRP3Q17RR3 467 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 FAM71F2Q6NXP2 309 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 WFDC9Q8NEX5 89 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 EDARADDQ8WWZ3 215 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 AGMATQ9BSE5 352 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 RNF167Q9H6Y7 350 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 KIAA1456Q9P272 454 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 DAPK2Q9UIK4 370 aa13.97□□□□□ -0.17
CTDNEP1-207ENST00000572043 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 METTL21EPA6NDL7 271 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 NOTOA8MTQ0 251 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 H7C2Y5 167 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 GSTT2P0CG29 244 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 GSTT2BP0CG30 244 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 HIST1H1DP16402 221 aaKnown RBP13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 FGF9P31371 208 aaPredicted RBP13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 LINC00205P59089 165 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 ARFRP1Q13795 201 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 IGSF11Q5DX21 431 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 COMMD1Q8N668 190 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 KCTD7Q96MP8 289 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 GON7Q9BXV9 100 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 PARP11Q9NR21 331 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZFP57Q9NU63 452 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 ZNF221Q9UK13 617 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 ELF5Q9UKW6 265 aaPredicted RBP13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 WSB1Q9Y6I7 421 aa13.96□□□□□ -0.17
CTDNEP1-207ENST00000572043 H0YJW9 148 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 ITGB1BP1O14713 200 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 GSTP1P09211 210 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 CLEC2LP0C7M8 214 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 SNRPBP14678 240 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 TALDO1P37837 337 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 MXD1Q05195 221 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 PLGLAQ15195 96 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 C5orf64Q2M2E5 130 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 CXorf66Q5JRM2 361 aaPredicted RBP13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 FOXB2Q5VYV0 432 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 LIN54Q6MZP7 749 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 MRPL41Q8IXM3 137 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 LINC00482Q8N8I6 264 aa13.95□□□□□ -0.18
CTDNEP1-207ENST00000572043 OR4A4PQ8NGN8 299 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms