RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 RNF222A6NCQ9 220 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 F5H0A9 414 aaPredicted RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 UCP1P25874 307 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 SWI5Q1ZZU3 235 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 Q3ZCU0 254 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 PRSS54Q6PEW0 395 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 ALKAL2Q6UX46 152 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 LYPD2Q6UXB3 125 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 CNTNAP3Q9BZ76 1288 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 FAM234AQ9H0X4 552 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 LAMP3Q9UQV4 416 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 FAM208BQ5VWN6 2430 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 DCHS2Q6V1P9 2916 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 ZNF462Q96JM2 2506 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 FLNCQ14315 2725 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 NDUFB3O43676 98 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 OR2F2O95006 317 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 MBPP02686 304 aaPredicted RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 COL8A2P25067 703 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 GPR12P47775 334 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 LINC00205P59089 165 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 ERVFRD-1P60508 538 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 RPL31P62899 125 aaKnown RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 HTD2P86397 168 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 ZNF816Q0VGE8 651 aaPredicted RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 OR2F1Q13607 317 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 IZUMO4Q1ZYL8 232 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 MORN2Q502X0 79 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 TCTEX1D2Q8WW35 142 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 EDARADDQ8WWZ3 215 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 RRNAD1Q96FB5 475 aaKnown RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 TMEM56Q96MV1 263 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 LIN7CQ9NUP9 197 aaKnown RBP5.86□□□□□ -1.47
SMG1-215ENST00000568239 UBQLN2Q9UHD9 624 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 TMEM56-RWDD3S4R434 201 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 SPG11Q96JI7 2443 aa5.86□□□□□ -1.47
SMG1-215ENST00000568239 KBTBD11-OT1A0A1B0GTJ5 212 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 hADV38S2A0JD32 116 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 MSGN1A6NI15 193 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 C19orf84I3L1E1 186 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 VDAC1P21796 283 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 GNG10P50151 68 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 PAX5Q02548 391 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 LRRC10Q5BKY1 277 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 KCNRGQ8N5I3 272 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SPIN2AQ99865 258 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SPIN2BQ9BPZ2 258 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 MAGT1Q9H0U3 335 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SEBOXQ9HB31 216 aaPredicted RBP5.85□□□□□ -1.47
SMG1-215ENST00000568239 CLN8Q9UBY8 286 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 RNF212BA8MTL3 300 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 K7EPK0 472 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 ST8SIA3O43173 380 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 RAMP3O60896 148 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 CLDN1O95832 211 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SOD3P08294 240 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 LOXP28300 417 aaPredicted RBP5.85□□□□□ -1.47
SMG1-215ENST00000568239 RAB14P61106 215 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 CATR1Q13166 79 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 IL15RAQ13261 267 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 ZNF345Q14585 488 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 NDUFA5Q16718 116 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 UTF1Q5T230 341 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 AVPI1Q5T686 147 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 CLEC9AQ6UXN8 241 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SLC51BQ86UW2 128 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 FAM71E2Q8N5Q1 922 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 TMEM204Q9BSN7 226 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 RAB1BQ9H0U4 201 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 UBTD1Q9HAC8 227 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 C19orf12Q9NSK7 152 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SDHAF2Q9NX18 166 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 JPT1Q9UK76 154 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 WNK2Q9Y3S1 2297 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 USP9XQ93008 2570 aaPredicted RBP5.85□□□□□ -1.47
SMG1-215ENST00000568239 WRBO00258 174 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 DVL1O14640 695 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 DEDDO75618 318 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 KRASP01116 189 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 NKX2-1P43699 371 aaPredicted RBP5.85□□□□□ -1.47
SMG1-215ENST00000568239 ZNF134P52741 427 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 LOXL3P58215 753 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 RPL30P62888 115 aaKnown RBP5.85□□□□□ -1.47
SMG1-215ENST00000568239 C17orf58Q2M2W7 97 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 PRAMEF5Q5TYX0 476 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SPAG16Q8N0X2 631 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 SMIM3Q9BZL3 60 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 RAB9BQ9NP90 201 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 CBLN4Q9NTU7 201 aa5.85□□□□□ -1.47
SMG1-215ENST00000568239 A0A0G2JRQ6 117 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 SLC31A2O15432 143 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 BCL2L11O43521 198 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 YPEL1O60688 119 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 MMP23AO75900 390 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 CCL3L1P16619 93 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 LPAR6P43657 344 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 POLR2GP62487 172 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMG1-215ENST00000568239 ZNF273Q14593 569 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 RPL39P5Q59GN2 51 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms