RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 Q8N9W7 124 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 OR8H1Q8NGG4 311 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 MRPL30Q8TCC3 161 aaKnown RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 RAB2BQ8WUD1 216 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 CYYR1Q96J86 154 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 NOL4LQ96MY1 436 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 YPEL2Q96QA6 119 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 S1PR3Q99500 378 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 GFI1Q99684 422 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 RASL11BQ9BPW5 248 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 NICN1Q9BSH3 213 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 URM1Q9BTM9 101 aaKnown RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 FUNDC2Q9BWH2 189 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 NAA50Q9GZZ1 169 aaKnown RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 ABCG5Q9H222 651 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 RIMS4Q9H426 269 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 LIN7CQ9NUP9 197 aaKnown RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 JPT1Q9UK76 154 aa5.47□□□□□ -1.53
SF3B3-209ENST00000567635 AK6Q9Y3D8 172 aaKnown RBP5.47□□□□□ -1.53
SF3B3-209ENST00000567635 TRBV6-6A0A0A6YYG2 114 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 AP4M1O00189 453 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 RGS13O14921 159 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 SOCS1O15524 211 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 NAPSAO96009 420 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 PF4P02776 101 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 CD36P16671 472 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 GPR12P47775 334 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 F2RL1P55085 397 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 GNMTQ14749 295 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 HMGN3Q15651 99 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 CTF1Q16619 201 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 C2orf76Q3KRA6 126 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 KHDC1LQ5JSQ8 128 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 ZNF880Q6PDB4 577 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 REC114Q7Z4M0 266 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 STPG2Q8N412 459 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 COMMD1Q8N668 190 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 OR51D1Q8NGF3 324 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 SETD6Q8TBK2 473 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 IL1F10Q8WWZ1 152 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 FAM3DQ96BQ1 224 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 ABHD14AQ9BUJ0 271 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 GON7Q9BXV9 100 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 LPAR5Q9H1C0 372 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 KCNK15Q9H427 330 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 CHMP1AQ9HD42 196 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-209ENST00000567635 ZFP57Q9NU63 452 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 STEAP1Q9UHE8 339 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 AK3Q9UIJ7 227 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 LINC00527Q9UJ94 153 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 HSF4Q9ULV5 492 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 V9GY05 133 aa5.46□□□□□ -1.54
SF3B3-209ENST00000567635 CMYA5Q8N3K9 4069 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 A0A0A6YYD4 124 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 TRAV1-2A0A0B4J238 106 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 H3BMQ9 156 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 PDCD5O14737 125 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 GABARAPO95166 117 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 PRB2P02812 416 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-209ENST00000567635 IGLL1P15814 213 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 M6PRP20645 277 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 SOX6P35712 828 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 OR3A3P47888 321 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 VEGFCP49767 419 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 TMEM50BP56557 158 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 RPL23AP62750 156 aaKnown RBP5.45□□□□□ -1.54
SF3B3-209ENST00000567635 PNLIPRP3Q17RR3 467 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 TEX38Q6PEX7 206 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 MOB1BQ7L9L4 216 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 ODF3L1Q8IXM7 274 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 FAM71E2Q8N5Q1 922 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 OR2AK2Q8NG84 335 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 OR56B1Q8NGI3 324 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 TRIM63Q969Q1 353 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 GHITMQ9H3K2 345 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 RAB22AQ9UL26 194 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 MGAT4AQ9UM21 535 aa5.45□□□□□ -1.54
SF3B3-209ENST00000567635 LOC105371267A0A1B0GV96 52 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 TRDV1A0A1B0GX56 115 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 FOXI3A8MTJ6 420 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-209ENST00000567635 NUDT19A8MXV4 375 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 J3QL48 77 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 RAB29O14966 203 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 LDLRAD4O15165 306 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 HSPA12AO43301 675 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 AIREO43918 545 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 DUS4LO95620 317 aaKnown RBP5.44□□□□□ -1.54
SF3B3-209ENST00000567635 CRYZL1O95825 349 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 GALP22466 123 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 ZBTB25P24278 435 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 SLC6A1P30531 599 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 MC5RP33032 325 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 CEACAM6P40199 344 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 CLDN12P56749 244 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 ACTBP60709 375 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 FOXE3Q13461 319 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 ZNF846Q147U1 533 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 MMDQ15546 238 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 SSX1Q16384 188 aa5.44□□□□□ -1.54
SF3B3-209ENST00000567635 TIMM50Q3ZCQ8 353 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms