RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FAM71F2Q6NXP2 309 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 FAM131AQ6UXB0 335 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 FAM89BQ8N5H3 189 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 SETD6Q8TBK2 473 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 DUSP21Q9H596 190 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 GNB4Q9HAV0 340 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 PARP11Q9NR21 331 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 PLEKHJ1Q9NW61 149 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 PIPOXQ9P0Z9 390 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 AK3Q9UIJ7 227 aa14.27□□□□□ -0.13
USB1-213ENST00000566292 TRBV6-6A0A0A6YYG2 114 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 FOXI3A8MTJ6 420 aaPredicted RBP14.26□□□□□ -0.13
USB1-213ENST00000566292 SLC17A2O00624 439 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 HSMCR30P0CW71 290 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 CT45A6P0DMU7 189 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 CT45A5P0DMU8 189 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 CT45A7P0DMV0 189 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 NDPQ00604 133 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 TPBGQ13641 420 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 C9orf66Q5T8R8 295 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 GLDNQ6ZMI3 551 aaPredicted RBP14.26□□□□□ -0.13
USB1-213ENST00000566292 MOB1BQ7L9L4 216 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 ZNF491Q8N8L2 437 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 OR11H1Q8NG94 326 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 ZMAT5Q9UDW3 170 aaKnown RBP14.26□□□□□ -0.13
USB1-213ENST00000566292 SLC23A1Q9UHI7 598 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 SCOCQ9UIL1 159 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 TPRKBQ9Y3C4 175 aa14.26□□□□□ -0.13
USB1-213ENST00000566292 AK6Q9Y3D8 172 aaKnown RBP14.26□□□□□ -0.13
USB1-213ENST00000566292 TRAV41A0A0B4J266 112 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 I3L521 148 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 RAB29O14966 203 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 RAMP3O60896 148 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 ARSBP15848 533 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 TMEM50BP56557 158 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 LIN54Q6MZP7 749 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 ABHD14BQ96IU4 210 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 UBE2E2Q96LR5 201 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 AGMATQ9BSE5 352 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 URM1Q9BTM9 101 aaKnown RBP14.25□□□□□ -0.13
USB1-213ENST00000566292 RIMS4Q9H426 269 aaPredicted RBP14.25□□□□□ -0.13
USB1-213ENST00000566292 PLGRKTQ9HBL7 147 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 ISYNA1Q9NPH2 558 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 OR1A1Q9P1Q5 309 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 KIAA1456Q9P272 454 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 FBXO7Q9Y3I1 522 aa14.25□□□□□ -0.13
USB1-213ENST00000566292 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 H0YJW9 148 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 ITGB1BP1O14713 200 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 HLA-DRB3P79483 266 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 C19orf54Q5BKX5 351 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 TMEM65Q6PI78 240 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 MINDY2Q8NBR6 621 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 PRR25Q96S07 402 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 FBXL15Q9H469 300 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 VSIG4Q9Y279 399 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 TENM3Q9P273 2699 aa14.24□□□□□ -0.13
USB1-213ENST00000566292 OR5H14A6NHG9 310 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 RRHO14718 337 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 RGS10O43665 173 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 CPEP16870 476 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 VEGFCP49767 419 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 RAB9AP51151 201 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 CLDN12P56749 244 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 GNB1P62873 340 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 RUNX1Q01196 453 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 MLLT11Q13015 90 aaPredicted RBP14.23□□□□□ -0.13
USB1-213ENST00000566292 DCTN2Q13561 401 aaKnown RBP14.23□□□□□ -0.13
USB1-213ENST00000566292 TRAM1Q15629 374 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 ARHGAP5-AS1Q96IT6 56 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 OR5B12Q96R08 314 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 C11orf54Q9H0W9 315 aaPredicted RBP14.23□□□□□ -0.13
USB1-213ENST00000566292 Q9N2K0 584 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 HSF4Q9ULV5 492 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 LSM4Q9Y4Z0 139 aaKnown RBP14.23□□□□□ -0.13
USB1-213ENST00000566292 NBEAL2Q6ZNJ1 2754 aa14.23□□□□□ -0.13
USB1-213ENST00000566292 FCN1O00602 326 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 SOX15O60248 233 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 PROP1O75360 226 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 ARL6IP5O75915 188 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 SCTP09683 121 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 SNRPBP14678 240 aaKnown RBP14.22□□□□□ -0.13
USB1-213ENST00000566292 CRHBPP24387 322 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 CEACAM6P40199 344 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 ECI1P42126 302 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 MAP2K4P45985 399 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 CRIP2P52943 208 aaPredicted RBP14.22□□□□□ -0.13
USB1-213ENST00000566292 CX3CL1P78423 397 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 FABP5Q01469 135 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 ZNF616Q08AN1 781 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 RAB11BQ15907 218 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 ECSCRQ19T08 205 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 ZNF260Q3ZCT1 412 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 OR5AN1Q8NGI8 311 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 OR1N2Q8NGR9 330 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 PECRQ9BY49 303 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 SORL1Q92673 2214 aa14.22□□□□□ -0.13
USB1-213ENST00000566292 KMT2CQ8NEZ4 4911 aaKnown RBP14.21□□□□□ -0.13
USB1-213ENST00000566292 IGKV1-6A0A0C4DH72 117 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms