RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 DUX4L5P0CJ88 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L6P0CJ89 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L7P0CJ90 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 AKR1C4P17516 323 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 VAMP1P23763 118 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 NFYBP25208 207 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 UCP1P25874 307 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 SSTR5P35346 364 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 FXYD4P59646 89 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 CATR1Q13166 79 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF345Q14585 488 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 IGSF11Q5DX21 431 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4L9Q6RFH8 374 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-207ENST00000566095 GSG1LQ6UXU4 331 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 UXS1Q8NBZ7 420 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 LY6G5BQ8NDX9 201 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 OR2T35Q8NGX2 323 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 OR1L1Q8NH94 360 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF596Q8TC21 504 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 CD300LFQ8TDQ1 290 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 CAPSLQ8WWF8 208 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 NRGNQ92686 78 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TOMM40LQ969M1 308 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 SLC5A7Q9GZV3 580 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 FXYD6Q9H0Q3 95 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM222Q9H0R3 208 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 RDH8Q9NYR8 311 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 DUX4Q9UBX2 424 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 KCNS2Q9ULS6 477 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 AKAP6Q13023 2319 aa8.1□□□□□ -1.11
SF3B3-207ENST00000566095 HRNRQ86YZ3 2850 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-207ENST00000566095 TENM4Q6N022 2769 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 IGHV4-30-2A0A087WSY4 118 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 IGHV2-70DA0A0C4DH43 119 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 C17orf98A8MV24 154 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 RGS13O14921 159 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 LY86O95711 162 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 IGHV1-8P0DP01 117 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 LYL1P12980 280 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 AADACP22760 399 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 NFYAP23511 347 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-207ENST00000566095 F2RP25116 425 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 H2BFSP57053 126 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 KRTAP10-9P60411 292 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 LMO4P61968 165 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 IL15RAQ13261 267 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF273Q14593 569 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 TMEM187Q14656 261 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 C17orf58Q2M2W7 97 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF66Q6ZN08 573 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ZNF645Q8N7E2 425 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 LINC01356Q8N9X3 169 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ADAD2Q8NCV1 583 aaKnown RBP8.09□□□□□ -1.11
SF3B3-207ENST00000566095 OR9G1Q8NH87 305 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 RFESDQ8TAC1 157 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 SECTM1Q8WVN6 248 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 C2orf50Q96LR7 162 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 S1PR3Q99500 378 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 SPIN2AQ99865 258 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 SPIN2BQ9BPZ2 258 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 ABHD14AQ9BUJ0 271 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 SLA2Q9H6Q3 261 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 COMMD9Q9P000 198 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 SPG11Q96JI7 2443 aa8.09□□□□□ -1.11
SF3B3-207ENST00000566095 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 A0A087X0M5 115 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 TRAV39A0A0B4J263 110 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 IGHV4-61A0A0C4DH41 118 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 A0A0D9SG52 128 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 C3orf85A0A1B0GTC6 90 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 A0A1B0GX30 115 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 J3QLI3 93 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 RAB29O14966 203 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 PHF1O43189 567 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 RBFOX2O43251 390 aaKnown RBP eCLIP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 TXNL1O43396 289 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 MSMBP08118 114 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 VDAC1P21796 283 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 CEACAM3P40198 252 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 GPR12P47775 334 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 LCN2P80188 198 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 LTC4SQ16873 150 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 MORN2Q502X0 79 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 PRAMEF5Q5TYX0 476 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 FAM71F2Q6NXP2 309 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 FAM219AQ8IW50 185 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 LINC00311Q8N616 119 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 OR52L2PQ8NGH6 319 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 OR52B4Q8NGK2 314 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 OR10X1Q8NGY0 326 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 GLYATL2Q8WU03 294 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 MSI2Q96DH6 328 aaKnown RBP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 HSD17B10Q99714 261 aaKnown RBP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 REG4Q9BYZ8 158 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 TMEM133Q9H2Q1 129 aa8.08□□□□□ -1.12
SF3B3-207ENST00000566095 LIN7CQ9NUP9 197 aaKnown RBP8.08□□□□□ -1.12
SF3B3-207ENST00000566095 KIAA1324LA8MWY0 1029 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms