RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 KCNE3Q9Y6H6 103 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 NKX2-6A6NCS4 301 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PRSS23O95084 383 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 RPS11P62280 158 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMG1-211ENST00000565324 C5orf30Q96GV9 206 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 HDHD3Q9BSH5 251 aaPredicted RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 SF3B5Q9BWJ5 86 aaKnown RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 STRCQ7RTU9 1775 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 TRAV8-7A0A075B6U6 113 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PTP4A3O75365 173 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 KLKB1P03952 638 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 ZNF32P17041 273 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PLNP26678 52 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 LINC01559Q495D7 138 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 TM4SF20Q53R12 229 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 OR51G1Q8NGK1 321 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 GMLQ99445 158 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 ZBP1Q9H171 429 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 ARID2Q68CP9 1835 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PLXNA1Q9UIW2 1896 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 IGHV3-20A0A0C4DH32 117 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 HOXC4P09017 264 aaPredicted RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 MESTQ5EB52 335 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 RHNO1Q9BSD3 238 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PDFQ9HBH1 243 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 RABAC1Q9UI14 185 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 SPCS1Q9Y6A9 102 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 PHF3Q92576 2039 aaKnown RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 ODAMA1E959 279 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 ZNF729A6NN14 1252 aaPredicted RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 K7N7A8 449 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 RPL34P49207 117 aaKnown RBP4.46□□□□□ -1.7
SMG1-211ENST00000565324 OR13C6PQ8NH95 151 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 FAM216AQ8WUB2 273 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 NUDT8Q8WV74 236 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 ORAI1Q96D31 301 aa4.46□□□□□ -1.7
SMG1-211ENST00000565324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MED19A0JLT2 244 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 SRIP30626 198 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 HIKESHIQ53FT3 197 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 SLC23A3Q6PIS1 610 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM222BQ8WU58 562 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CHST5Q9GZS9 411 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 SIRT5Q9NXA8 310 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 SPANXCQ9NY87 97 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 DOCK10Q96BY6 2186 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LRRK1Q38SD2 2015 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MYOGP15173 224 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 HTN1P15515 57 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 SRSF4Q08170 494 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 COL9A2Q14055 689 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.72e-6■□□□□ 8.9
SMG1-211ENST00000565324 LYZL2Q7Z4W2 148 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CCL17Q92583 94 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CNRIP1Q96F85 164 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 SDHCQ99643 169 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 GPR35Q9HC97 309 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 TCRBV5S1A1TA0A578 114 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 ZNF250P15622 560 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 GUCA2BQ16661 112 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 HOGA1Q86XE5 327 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RFESDQ8TAC1 157 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MS4A7Q9GZW8 240 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 GCM2O75603 506 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 CA1P00915 261 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 RNF224P0DH78 156 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 RPL8P62917 257 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 RTP5Q14D33 572 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MEIG1Q5JSS6 88 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 ZNF645Q8N7E2 425 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CBLN4Q9NTU7 201 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 MRM2Q9UI43 246 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 TBL2Q9Y4P3 447 aaKnown RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 NCKAP5O14513 1909 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 IGLV3-16A0A075B6K0 115 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 DANCRP0C864 163 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 COX7A1P24310 79 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 GALNSP34059 522 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 TMEM30BQ3MIR4 351 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 LRTM2Q8N967 370 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 OR4X2Q8NGF9 303 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 OPN3Q9H1Y3 402 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
SMG1-211ENST00000565324 MED12Q93074 2177 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 C7orf71A4D174 169 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A10PA6NDY2 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A18PA6NE21 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A16PA6NEW6 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A20PA6NIJ5 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A8PA6NJQ4 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A7PA6NKC0 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 CEACAM18A8MTB9 384 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A22PA8MWA6 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A12PA8MX19 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A5PA8MXJ8 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A23PA8MXZ1 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A15PP0C7V4 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A13PP0C7W8 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A14PP0C7W9 464 aa4.45□□□□□ -1.7
SMG1-211ENST00000565324 FAM90A24PP0C7X0 464 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms