RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 C11orf88Q6PI97 169 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
RNF40-206ENST00000564260 BEST4Q8NFU0 473 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 OR8H1Q8NGG4 311 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 OR4F5Q8NH21 305 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 CFHR4Q92496 578 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 NPFFR1Q9GZQ6 430 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 IFT46Q9NQC8 304 aa13.42□□□□□ -0.26
RNF40-206ENST00000564260 ELF5Q9UKW6 265 aaPredicted RBP13.42□□□□□ -0.26
RNF40-206ENST00000564260 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 A0A1W2PPE3 182 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 TIMM23O14925 209 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 BET1O15155 118 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 SLC31A2O15432 143 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 TSPAN9O75954 239 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 TAS2R46P59540 309 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 ARPC4P59998 168 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 ODF3L1Q8IXM7 274 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 H1FOOQ8IZA3 346 aaPredicted RBP13.41□□□□□ -0.26
RNF40-206ENST00000564260 GPX8Q8TED1 209 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 GCDHQ92947 438 aaPredicted RBP13.41□□□□□ -0.26
RNF40-206ENST00000564260 C11orf54Q9H0W9 315 aaPredicted RBP13.41□□□□□ -0.26
RNF40-206ENST00000564260 MMP27Q9H306 513 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 OR1A1Q9P1Q5 309 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 ZNF221Q9UK13 617 aa13.41□□□□□ -0.26
RNF40-206ENST00000564260 SAA2-SAA4A0A096LPE2 208 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 OR2F2O95006 317 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 SAA2P0DJI9 122 aaPredicted RBP13.4□□□□□ -0.26
RNF40-206ENST00000564260 TAGLNQ01995 201 aaKnown RBP13.4□□□□□ -0.26
RNF40-206ENST00000564260 SSBP1Q04837 148 aaKnown RBP13.4□□□□□ -0.26
RNF40-206ENST00000564260 MSMO1Q15800 293 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 IGSF11Q5DX21 431 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 MCFD2Q8NI22 146 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 CAPSLQ8WWF8 208 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 RBM14Q96PK6 669 aaKnown RBP13.4□□□□□ -0.26
RNF40-206ENST00000564260 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 C1RLQ9NZP8 487 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 EXTL2Q9UBQ6 330 aa13.4□□□□□ -0.26
RNF40-206ENST00000564260 ZNF107Q9UII5 783 aaPredicted RBP13.4□□□□□ -0.26
RNF40-206ENST00000564260 OR5H14A6NHG9 310 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 MC5RP33032 325 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 RCVRNP35243 200 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 ACTBP60709 375 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 ACTBL2Q562R1 376 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 DRAM1Q8N682 238 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 OR4C13Q8NGP0 309 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 OR2T10Q8NGZ9 312 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 OR56B4Q8NH76 319 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 BEX1Q9HBH7 125 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 OR2W1Q9Y3N9 320 aa13.39□□□□□ -0.27
RNF40-206ENST00000564260 IGKV1D-8A0A087WSZ0 117 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 CTDSPLO15194 276 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 ST8SIA5O15466 376 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 FGF16O43320 207 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 TUSC2O75896 110 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 TBPP20226 339 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 GPR12P47775 334 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 RAG2P55895 527 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 LSAMPQ13449 338 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 FAM53AQ6NSI3 398 aaPredicted RBP13.38□□□□□ -0.27
RNF40-206ENST00000564260 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 LAX1Q8IWV1 398 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 MAFIPQ8WZ33 124 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 BORCS5Q969J3 196 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 RNF5Q99942 180 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 ZNF251Q9BRH9 671 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 C6orf62Q9GZU0 229 aaPredicted RBP13.38□□□□□ -0.27
RNF40-206ENST00000564260 MIXL1Q9H2W2 232 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
RNF40-206ENST00000564260 MRPS7Q9Y2R9 242 aaKnown RBP13.38□□□□□ -0.27
RNF40-206ENST00000564260 CTDSP2O14595 271 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 RBBP9O75884 186 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 MOSP00540 346 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF40-206ENST00000564260 RAB13P51153 203 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 LUMP51884 338 aaPredicted RBP13.37□□□□□ -0.27
RNF40-206ENST00000564260 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 CDK10Q15131 360 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 LY6EQ16553 131 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 C5orf24Q7Z6I8 188 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 Q8N2B8 174 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 GVQW1Q8N7I0 195 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 SNAPC3Q92966 411 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 ADTRPQ96IZ2 230 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 MDFIQ99750 246 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 NABP2Q9BQ15 211 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
RNF40-206ENST00000564260 GABARAPH6UMI1 98 aa13.36□□□□□ -0.27
RNF40-206ENST00000564260 SNRNP70P08621 437 aaKnown RBP13.36□□□□□ -0.27
RNF40-206ENST00000564260 OR5H8P0DN80 308 aa13.36□□□□□ -0.27
RNF40-206ENST00000564260 TMEM11P17152 192 aa13.36□□□□□ -0.27
RNF40-206ENST00000564260 PAX6P26367 422 aa13.36□□□□□ -0.27
RNF40-206ENST00000564260 S100A5P33763 92 aa13.36□□□□□ -0.27
RNF40-206ENST00000564260 SRSF2Q01130 221 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms