RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TRIM64CA6NLI5 447 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 RAB29O14966 203 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 IGHV3-11P01762 117 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 RPS11P62280 158 aaKnown RBP eCLIP16.13■□□□□ 0.17
HERC2-204ENST00000563945 LRRC36Q1X8D7 754 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 ACTBL2Q562R1 376 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 SIGIRRQ6IA17 410 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 UNQ5815/PRO19632Q6UWF5 114 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 PQLC1Q8N2U9 271 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 MS4A10Q96PG2 267 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 CITED4Q96RK1 184 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 S100A14Q9HCY8 104 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 TENM2Q9NT68 2774 aa16.13■□□□□ 0.17
HERC2-204ENST00000563945 LDLRAD4O15165 306 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 SOX15O60248 233 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 MAPK3P27361 379 aaPredicted RBP16.12■□□□□ 0.17
HERC2-204ENST00000563945 CRIP2P52943 208 aaPredicted RBP16.12■□□□□ 0.17
HERC2-204ENST00000563945 TPPP2P59282 170 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 ANKRD13BQ86YJ7 626 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 SGPP2Q8IWX5 399 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 SETD6Q8TBK2 473 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 PGLYRP3Q96LB9 341 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 CLCC1Q96S66 551 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 RSRP1Q9BUV0 290 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 STUB1Q9UNE7 303 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 FBXO7Q9Y3I1 522 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 NUBP2Q9Y5Y2 271 aa16.12■□□□□ 0.17
HERC2-204ENST00000563945 OR5H14A6NHG9 310 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 ST8SIA5O15466 376 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 RBBP9O75884 186 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 UBBP0CG47 229 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 NDPQ00604 133 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 ZFAND6Q6FIF0 208 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 CD200R1LQ6Q8B3 271 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 SETD9Q8NE22 299 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 DERL3Q96Q80 235 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 FAAP24Q9BTP7 215 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 SLA2Q9H6Q3 261 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 ZNF355PQ9NSJ1 428 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 SLC23A1Q9UHI7 598 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 WASHC3Q9Y3C0 194 aa16.11■□□□□ 0.17
HERC2-204ENST00000563945 CELP19835 753 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 ST3GAL4Q11206 333 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 HMGN3Q15651 99 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 AKIRIN2Q53H80 203 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 TTC23Q5W5X9 447 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 CYGBQ8WWM9 190 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 ISOC1Q96CN7 298 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 RNF5Q99942 180 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 IFI27L2Q9H2X8 130 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 TPSG1Q9NRR2 321 aa16.1■□□□□ 0.17
HERC2-204ENST00000563945 HUWE1Q7Z6Z7 4374 aaKnown RBP16.09■□□□□ 0.17
HERC2-204ENST00000563945 LCE6AA0A183 80 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 FCN1O00602 326 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 MYL12BO14950 172 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 TRGV3P03979 118 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 CT45A6P0DMU7 189 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 CT45A5P0DMU8 189 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 CT45A7P0DMV0 189 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 RPL39P5Q59GN2 51 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 C19orf54Q5BKX5 351 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 C6orf141Q5SZD1 244 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 ZNF562Q6V9R5 426 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 GLDNQ6ZMI3 551 aaPredicted RBP16.09■□□□□ 0.17
HERC2-204ENST00000563945 LFNGQ8NES3 379 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 SULT4A1Q9BR01 284 aa16.09■□□□□ 0.17
HERC2-204ENST00000563945 FAM103A1Q9BTL3 118 aaKnown RBP16.09■□□□□ 0.17
HERC2-204ENST00000563945 CNOT2Q9NZN8 540 aaKnown RBP16.09■□□□□ 0.17
HERC2-204ENST00000563945 METTL1Q9UBP6 276 aaKnown RBP16.09■□□□□ 0.17
HERC2-204ENST00000563945 EFCAB10A6NFE3 127 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 HSPA12AO43301 675 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 TFAP2AP05549 437 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 IGHV4-30-4P0DP06 118 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 ZP3P21754 424 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 GLT8D1Q68CQ7 371 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 C6orf201Q7Z4U5 140 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 LYPD6Q86Y78 171 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 GGHQ92820 318 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 ABHD14BQ96IU4 210 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 RHOVQ96L33 236 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 TSNAXQ99598 290 aaKnown RBP16.08■□□□□ 0.16
HERC2-204ENST00000563945 TMEM59Q9BXS4 323 aa16.08■□□□□ 0.16
HERC2-204ENST00000563945 RANGRFQ9HD47 186 aaPredicted RBP16.08■□□□□ 0.16
HERC2-204ENST00000563945 C13orf42A0A1B0GVH6 325 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 H0YJW9 148 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 SLC22A1O15245 554 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 EGR2P11161 476 aaPredicted RBP16.07■□□□□ 0.16
HERC2-204ENST00000563945 CPEP16870 476 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 RPS16P62249 146 aaKnown RBP16.07■□□□□ 0.16
HERC2-204ENST00000563945 MOB1BQ7L9L4 216 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 ZNF485Q8NCK3 441 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 KCNG3Q8TAE7 436 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 EDARADDQ8WWZ3 215 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 TM2D3Q9BRN9 247 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 RIMS4Q9H426 269 aaPredicted RBP16.07■□□□□ 0.16
HERC2-204ENST00000563945 PLEKHJ1Q9NW61 149 aa16.07■□□□□ 0.16
HERC2-204ENST00000563945 DYNC2H1Q8NCM8 4307 aaKnown RBP16.06■□□□□ 0.16
HERC2-204ENST00000563945 CD1AP06126 327 aa16.06■□□□□ 0.16
HERC2-204ENST00000563945 ARSBP15848 533 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms