RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TP53RKQ96S44 253 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 CHIAQ9BZP6 476 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 WNK2Q9Y3S1 2297 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 A0A0B4J2A0 478 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 A0A1W2PPE3 182 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 C22orf46C9J442 243 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 PAX1P15863 534 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 ZNF134P52741 427 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 C11orf91Q3C1V1 193 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 ZBTB34Q8NCN2 500 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 C10orf105Q8TEF2 133 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 SHPKQ9UHJ6 478 aa18.03■□□□□ 0.48
LINC01960-201ENST00000563759 LOC105371242A0A075B767 164 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 CCSO14618 274 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 ITGB1BP1O14713 200 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 SLC31A2O15432 143 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 SIX6O95475 246 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 LIPFP07098 398 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 F2RP25116 425 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 TMEM187Q14656 261 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 MSMO1Q15800 293 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 Q3ZCU0 254 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 IFI27L2Q9H2X8 130 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 ONECUT1Q9UBC0 465 aa18.02■□□□□ 0.48
LINC01960-201ENST00000563759 DBX1A6NMT0 343 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 RNF212BA8MTL3 300 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 IGHV1-8P0DP01 117 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 ZNF16P17020 682 aaPredicted RBP18.01■□□□□ 0.47
LINC01960-201ENST00000563759 CT45A1Q5HYN5 189 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 LY6G6FQ5SQ64 297 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 BTNL3Q6UXE8 466 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 TCTE3Q8IZS6 198 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 OR5M8Q8NGP6 311 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 CT45A3Q8NHU0 189 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 LIN7CQ9NUP9 197 aaKnown RBP18.01■□□□□ 0.47
LINC01960-201ENST00000563759 C17orf98A8MV24 154 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 FAM25EA8MYX2 175 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 H0Y980 276 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 H2BFSP57053 126 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 LIAT1Q6ZQX7 453 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 ZNF439Q8NDP4 499 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 GLYATL2Q8WU03 294 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 TMEM222Q9H0R3 208 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 SDHAF2Q9NX18 166 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 MED13LQ71F56 2210 aa18.01■□□□□ 0.47
LINC01960-201ENST00000563759 CSMD2Q7Z408 3487 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 hCG_1809904A0A1W2PP81 198 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 A0A1W2PPE2 198 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 A0A1W2PR64 198 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 A0A1W2PRV1 198 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 SRPXP78539 464 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 DCAF12L2Q5VW00 463 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 HIST2H2BCQ6DN03 193 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 LY6G5BQ8NDX9 201 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 C5orf30Q96GV9 206 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 PDCD10Q9BUL8 212 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 METTL8Q9H825 291 aaKnown RBP18■□□□□ 0.47
LINC01960-201ENST00000563759 RAB18Q9NP72 206 aa18■□□□□ 0.47
LINC01960-201ENST00000563759 GIPP09681 153 aaPredicted RBP17.99■□□□□ 0.47
LINC01960-201ENST00000563759 CATR1Q13166 79 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 SLC25A48Q6ZT89 311 aaKnown RBP17.99■□□□□ 0.47
LINC01960-201ENST00000563759 LGI3Q8N145 548 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 LYG1Q8N1E2 194 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 SESN1Q9Y6P5 492 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 NBPF19A0A087WUL8 3843 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 ADAP1O75689 374 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 B3GALNT1O75752 331 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 RBP4P02753 201 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 HOXB5P09067 269 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 LMO4P61968 165 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 ZFP69Q49AA0 526 aa17.99■□□□□ 0.47
LINC01960-201ENST00000563759 MSI2Q96DH6 328 aaKnown RBP17.99■□□□□ 0.47
LINC01960-201ENST00000563759 APCP25054 2843 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 ABCA2Q9BZC7 2435 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 VPS13CQ709C8 3753 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 IGHV4-30-2A0A087WSY4 118 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 SAA2-SAA4A0A096LPE2 208 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 RAB29O14966 203 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 SAA2P0DJI9 122 aaPredicted RBP17.98■□□□□ 0.47
LINC01960-201ENST00000563759 DSCR9P59020 149 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 LCN2P80188 198 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 C11orf42Q8N5U0 333 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 TMEM133Q9H2Q1 129 aa17.98■□□□□ 0.47
LINC01960-201ENST00000563759 FASNP49327 2511 aaKnown RBP17.98■□□□□ 0.47
LINC01960-201ENST00000563759 NAV2Q8IVL1 2488 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 C5orf51A6NDU8 294 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 KIAA1324LA8MWY0 1029 aaPredicted RBP17.97■□□□□ 0.47
LINC01960-201ENST00000563759 VWC2LB2RUY7 222 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 SMLR1H3BR10 107 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 SERPINE2P07093 398 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 HLA-GP17693 338 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 DNASE1P24855 282 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 UCP1P25874 307 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 ZFP36P26651 326 aaKnown RBP17.97■□□□□ 0.47
LINC01960-201ENST00000563759 RPL39P5Q59GN2 51 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 TMEM268Q5VZI3 342 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 GSG1LQ6UXU4 331 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 ZNF695Q8IW36 515 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 LRTM2Q8N967 370 aa17.97■□□□□ 0.47
LINC01960-201ENST00000563759 TCTEX1D2Q8WW35 142 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms