RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ELANEP08246 267 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 VDAC1P21796 283 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 PSMA1P25786 263 aaKnown RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 CALRP27797 417 aaKnown RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 PSMB8P28062 276 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 CDX1P47902 265 aaPredicted RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 CLDN12P56749 244 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 KIR2DS1Q14954 304 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 RAB11BQ15907 218 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 DEFB136Q30KP8 78 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 C2orf76Q3KRA6 126 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 KCTD7Q96MP8 289 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 ZNF251Q9BRH9 671 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 URM1Q9BTM9 101 aaKnown RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 MCRIP2Q9BUT9 160 aaKnown RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 GPR61Q9BZJ8 451 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 PARP12Q9H0J9 701 aaKnown RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 RIMS4Q9H426 269 aaPredicted RBP8.05□□□□□ -1.12
CLK3-205ENST00000561673 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 STEAP1Q9UHE8 339 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 SLC23A1Q9UHI7 598 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 HSF4Q9ULV5 492 aa8.05□□□□□ -1.12
CLK3-205ENST00000561673 G3V318 75 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 RAB29O14966 203 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 NBR2O15453 112 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 CEACAM6P40199 344 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 VEGFCP49767 419 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 RAB25P57735 213 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 PLA2G7Q13093 441 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 C5orf64Q2M2E5 130 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 RPL39P5Q59GN2 51 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 DEFB121Q5J5C9 76 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 LIN54Q6MZP7 749 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 FAM71F2Q6NXP2 309 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 IZUMO2Q6UXV1 221 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 MOB1BQ7L9L4 216 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 NPBQ8NG41 125 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 FAM3DQ96BQ1 224 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 ARHGAP5-AS1Q96IT6 56 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 ABHD14BQ96IU4 210 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 AGMATQ9BSE5 352 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 KLK15Q9H2R5 256 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 VCX3BQ9H321 246 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 OR51J1Q9H342 316 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 ACOT13Q9NPJ3 140 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 PIPOXQ9P0Z9 390 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 OR1A1Q9P1Q5 309 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 ZNF580Q9UK33 172 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 WSB1Q9Y6I7 421 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 V9GY05 133 aa8.04□□□□□ -1.12
CLK3-205ENST00000561673 IGHV7-81A0A0B4J1V7 117 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 ITGB1BP1O14713 200 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 LDLRAD4O15165 306 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 ATP6V0E1O15342 81 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 NDUFA3O95167 84 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 HLA-DRB1P01911 266 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 SCTP09683 121 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 OR5H8P0DN80 308 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 ZBTB25P24278 435 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 PPIFP30405 207 aaKnown RBP8.03□□□□□ -1.12
CLK3-205ENST00000561673 HSPA13P48723 471 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 PSMD7P51665 324 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 HLA-DRB3P79483 266 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 KIAA0141Q14154 515 aaPredicted RBP8.03□□□□□ -1.12
CLK3-205ENST00000561673 SSX1Q16384 188 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 PLAC9Q5JTB6 97 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 FAM131AQ6UXB0 335 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 GLDNQ6ZMI3 551 aaPredicted RBP8.03□□□□□ -1.12
CLK3-205ENST00000561673 OR8U1Q8NH10 309 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 DPF1Q92782 380 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 PECRQ9BY49 303 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 C11orf54Q9H0W9 315 aaPredicted RBP8.03□□□□□ -1.12
CLK3-205ENST00000561673 Q9N2K0 584 aa8.03□□□□□ -1.12
CLK3-205ENST00000561673 IGKV1-6A0A0C4DH72 117 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 TMEM272A0A1B0GTI8 110 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 H0YJW9 148 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 HSPA12AO43301 675 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 PROP1O75360 226 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 IGLV1-40P01703 118 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 TBCEQ15813 527 aaPredicted RBP8.02□□□□□ -1.13
CLK3-205ENST00000561673 HES5Q5TA89 166 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 ZNF367Q7RTV3 350 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 MINDY2Q8NBR6 621 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 OR56B1Q8NGI3 324 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 MYOZ3Q8TDC0 251 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 PTX4Q96A99 478 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 CMSS1Q9BQ75 279 aaKnown RBP8.02□□□□□ -1.13
CLK3-205ENST00000561673 GHITMQ9H3K2 345 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 PARP11Q9NR21 331 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 KIAA1456Q9P272 454 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 RAB22AQ9UL26 194 aa8.02□□□□□ -1.13
CLK3-205ENST00000561673 RNF150Q9ULK6 438 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms