RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NSG2Q9Y328 171 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 LINC00312Q9Y6C7 94 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 A0A1B0GU03 582 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 hADV38S2A0JD32 116 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 KCNAB3O43448 404 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 ADAM20O43506 726 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 HKR1P10072 659 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 CATR1Q13166 79 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 HFEQ30201 348 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 CLLU1Q5K131 121 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 ST8SIA2Q92186 375 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 GSX2Q9BZM3 304 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 PLEKHA2Q9HB19 425 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 CBLN4Q9NTU7 201 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 GFOD1Q9NXC2 390 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 TAS2R3Q9NYW6 316 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 GAB2Q9UQC2 676 aa10.68□□□□□ -0.7
SNX1-211ENST00000560829 LSM5Q9Y4Y9 91 aaKnown RBP10.68□□□□□ -0.7
SNX1-211ENST00000560829 ANKHD1Q8IWZ3 2542 aaKnown RBP10.67□□□□□ -0.7
SNX1-211ENST00000560829 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 KALRNO60229 2985 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 PITX3O75364 302 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 FCN3O75636 299 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 SCGB1D2O95969 90 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 RPL30P62888 115 aaKnown RBP10.67□□□□□ -0.7
SNX1-211ENST00000560829 THOC7Q6I9Y2 204 aaKnown RBP10.67□□□□□ -0.7
SNX1-211ENST00000560829 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 FOXRED2Q8IWF2 684 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 OR10A7Q8NGE5 316 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 STOML3Q8TAV4 291 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 SCARB1Q8WTV0 552 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 HSD17B10Q99714 261 aaKnown RBP10.67□□□□□ -0.7
SNX1-211ENST00000560829 C11orf1Q9H5F2 150 aa10.67□□□□□ -0.7
SNX1-211ENST00000560829 A0A0G2JRQ6 117 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 F5H0A9 414 aaPredicted RBP10.66□□□□□ -0.7
SNX1-211ENST00000560829 RPL12P30050 165 aaKnown RBP10.66□□□□□ -0.7
SNX1-211ENST00000560829 NKX2-1P43699 371 aaPredicted RBP10.66□□□□□ -0.7
SNX1-211ENST00000560829 P2RY1P47900 373 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 ID3Q02535 119 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 LTC4SQ16873 150 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 DMBX1Q8NFW5 382 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 PHYHIPLQ96FC7 376 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 ZNF471Q9BX82 626 aaPredicted RBP10.66□□□□□ -0.7
SNX1-211ENST00000560829 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 CYTL1Q9NRR1 136 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 IDI2-AS1Q9NZ38 188 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 LPAR3Q9UBY5 353 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 RCL1Q9Y2P8 373 aaKnown RBP10.66□□□□□ -0.7
SNX1-211ENST00000560829 TAAR5O14804 337 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 NDUFB3O43676 98 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 PROP1O75360 226 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 SPDEFO95238 335 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 CLDN1O95832 211 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 IGKV1-5P01602 117 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 NDUFB7P17568 137 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 IGFBP2P18065 325 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 OMGP23515 440 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 RAB7AP51149 207 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 ZNF134P52741 427 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 BRWD1-AS2P59051 145 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 LYPD2Q6UXB3 125 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 DTX2Q86UW9 622 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 FGFRL1Q8N441 504 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 CTSZQ9UBR2 303 aa10.66□□□□□ -0.7
SNX1-211ENST00000560829 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 DANCRP0C864 163 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 MMP9P14780 707 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 ZNF16P17020 682 aaPredicted RBP10.65□□□□□ -0.7
SNX1-211ENST00000560829 GPR12P47775 334 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 RPL31P62899 125 aaKnown RBP10.65□□□□□ -0.7
SNX1-211ENST00000560829 MRPS11P82912 194 aaKnown RBP10.65□□□□□ -0.7
SNX1-211ENST00000560829 Q3ZCU0 254 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 LRRC10Q5BKY1 277 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 GPR157Q5UAW9 335 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 ALKAL2Q6UX46 152 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
SNX1-211ENST00000560829 ZNF439Q8NDP4 499 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 RAB1BQ9H0U4 201 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 C19orf12Q9NSK7 152 aa10.65□□□□□ -0.7
SNX1-211ENST00000560829 RPUSD1Q9UJJ7 312 aaKnown RBP10.65□□□□□ -0.7
SNX1-211ENST00000560829 DYSFO75923 2080 aa10.65□□□□□ -0.71
SNX1-211ENST00000560829 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 KIAA1324LA8MWY0 1029 aaPredicted RBP10.64□□□□□ -0.71
SNX1-211ENST00000560829 P0C879 139 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 COL8A2P25067 703 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 DUTP33316 252 aaKnown RBP10.64□□□□□ -0.71
SNX1-211ENST00000560829 LPAR6P43657 344 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 RAB14P61106 215 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 ZNF273Q14593 569 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 CXorf66Q5JRM2 361 aaPredicted RBP10.64□□□□□ -0.71
SNX1-211ENST00000560829 SPAG16Q8N0X2 631 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
SNX1-211ENST00000560829 LINC00473A8K010 186 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms