RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RRNAD1Q96FB5 475 aaKnown RBP10.49□□□□□ -0.73
USP3-213ENST00000559711 RAB1BQ9H0U4 201 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 FAM212BQ9NTI7 297 aaPredicted RBP10.49□□□□□ -0.73
USP3-213ENST00000559711 SDHAF2Q9NX18 166 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 GFOD1Q9NXC2 390 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 ITGB1BP2Q9UKP3 347 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 PSG11Q9UQ72 335 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 DSCAMO60469 2012 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 ABCA4P78363 2273 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 C19orf84I3L1E1 186 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 NDUFB3O43676 98 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 IGKV1-39P01597 117 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 IGKV1D-39P04432 117 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 SOD3P08294 240 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 SLC25A6P12236 298 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 OMGP23515 440 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 HCFC1P51610 2035 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 S100A10P60903 97 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 MRPS11P82912 194 aaKnown RBP10.48□□□□□ -0.73
USP3-213ENST00000559711 CACNA1BQ00975 2339 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 LTC4SQ16873 150 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 LRRC10Q5BKY1 277 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 KIAA2026Q5HYC2 2103 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 ARFGEF3Q5TH69 2177 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 SLC51BQ86UW2 128 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
USP3-213ENST00000559711 AQP10Q96PS8 301 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 IDI2-AS1Q9NZ38 188 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 GAB2Q9UQC2 676 aa10.48□□□□□ -0.73
USP3-213ENST00000559711 SPTBN1Q01082 2364 aaKnown RBP10.48□□□□□ -0.73
USP3-213ENST00000559711 A0A1W2PPR1 153 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 B8ZZF3 427 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 K7EPK0 472 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 KCNAB3O43448 404 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 BCL2L11O43521 198 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 ZNF134P52741 427 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 RPL30P62888 115 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 SMCO1Q147U7 214 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 FAM219AQ8IW50 185 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 FAM71E2Q8N5Q1 922 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 ABHD14BQ96IU4 210 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 HSD17B10Q99714 261 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 C19orf12Q9NSK7 152 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 CTSZQ9UBR2 303 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 LPAR3Q9UBY5 353 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 A0A1B0GU03 582 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 MSGN1A6NI15 193 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 LYNX1G3V0Z9 82 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 DVL1O14640 695 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 ST8SIA3O43173 380 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 PROP1O75360 226 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 CLDN1O95832 211 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 LYNX1P0DP58 116 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 RAB7AP51149 207 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 CATR1Q13166 79 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 NEU4Q8WWR8 484 aaPredicted RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 IFI27L2Q9H2X8 130 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 RPUSD1Q9UJJ7 312 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 LSM5Q9Y4Y9 91 aaKnown RBP10.47□□□□□ -0.73
USP3-213ENST00000559711 POMT1Q9Y6A1 747 aa10.47□□□□□ -0.73
USP3-213ENST00000559711 A0A0G2JRQ6 117 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 E5RGE8 158 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 PITX3O75364 302 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 SCGB1D2O95969 90 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.74
USP3-213ENST00000559711 HTR2BP41595 481 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 GPR12P47775 334 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 ID3Q02535 119 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 ZNF273Q14593 569 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 CT45A1Q5HYN5 189 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 THOC7Q6I9Y2 204 aaKnown RBP10.46□□□□□ -0.74
USP3-213ENST00000559711 FOXRED2Q8IWF2 684 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 ZNF439Q8NDP4 499 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 CT45A3Q8NHU0 189 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 GPR146Q96CH1 333 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 BBC3Q96PG8 261 aaPredicted RBP10.46□□□□□ -0.74
USP3-213ENST00000559711 ARPC5LQ9BPX5 153 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 GAL3ST2Q9H3Q3 398 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 PLEKHA2Q9HB19 425 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 UBQLN2Q9UHD9 624 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 NSG2Q9Y328 171 aa10.46□□□□□ -0.74
USP3-213ENST00000559711 MMP23AO75900 390 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 IGKV1-5P01602 117 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 HKR1P10072 659 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 DUTP33316 252 aaKnown RBP10.45□□□□□ -0.74
USP3-213ENST00000559711 LPAR6P43657 344 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 NKX2-1P43699 371 aaPredicted RBP10.45□□□□□ -0.74
USP3-213ENST00000559711 UBA52P62987 128 aaKnown RBP10.45□□□□□ -0.74
USP3-213ENST00000559711 Q3ZCU0 254 aa10.45□□□□□ -0.74
USP3-213ENST00000559711 UTF1Q5T230 341 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms