RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TMED3Q9Y3Q3 217 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 DOPEY2Q9Y3R5 2298 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 PCDH15Q96QU1 1955 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 CHD8Q9HCK8 2581 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 TRBV5-5A0A0J9YX44 114 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 C1QL1O75973 258 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 PTBP3O95758 552 aaKnown RBP9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 NRN1LQ496H8 165 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 DYRK2Q92630 601 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 PCGF1Q9BSM1 259 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 SOX7Q9BT81 388 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 SLC25A10Q9UBX3 287 aaPredicted RBP9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 TUBD1Q9UJT1 453 aa9.12□□□□□ -0.95
CARMIL3-202ENST00000559694 M0R143 59 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 CYB5R3P00387 301 aaPredicted RBP9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 KITLGP21583 273 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 KCNMB1Q16558 191 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 TOMM20LQ6UXN7 152 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 UHRF2Q96PU4 802 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 LIN7CQ9NUP9 197 aaKnown RBP9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 G3V3Q6 166 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 PRRX1P54821 245 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 PSG7Q13046 419 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 FGFBP3Q8TAT2 258 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 PLSCR4Q9NRQ2 329 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 MUC22E2RYF6 1773 aaPredicted RBP9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 SMPD2O60906 423 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 CD8AP01732 235 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 COL10A1Q03692 680 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 IL13RA2Q14627 380 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 FAM103A1Q9BTL3 118 aaKnown RBP9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 GGACTQ9BVM4 153 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 REG4Q9BYZ8 158 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 NAA60Q9H7X0 242 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 PROK2Q9HC23 129 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 TNFRSF19Q9NS68 423 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 DMRT1Q9Y5R6 373 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
CARMIL3-202ENST00000559694 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 A0A0G2JNJ9 132 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 A0A1B0GV90 55 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 K7EM74 188 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 ZNF90Q03938 601 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 STUMQ69YW2 141 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 TRAT1Q6PIZ9 186 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 ZCCHC24Q8N2G6 241 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 SLC25A28Q96A46 364 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 POM121L2Q96KW2 1035 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 Q9UFV3 132 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 ANXA10Q9UJ72 324 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 E9PQ18 207 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 RBM11P57052 281 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 ST6GALNAC3Q8NDV1 305 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 DENND4AQ7Z401 1863 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 HMGB3O15347 200 aaKnown RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 FCGR3BO75015 233 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 ACAA1P09110 424 aaPredicted RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 HDHD3Q9BSH5 251 aaPredicted RBP9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 DOK5Q9P104 306 aa9.1□□□□□ -0.95
CARMIL3-202ENST00000559694 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 J3QW42 95 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 TRGC2P03986 189 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 OPN1MWP04001 364 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 OPN1MW2P0DN77 364 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 OPN1MW3P0DN78 364 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 HNF1AP20823 631 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CEBPDP49716 269 aaPredicted RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 MRPS11P82912 194 aaKnown RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 FDX2Q6P4F2 183 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 MS4A10Q96PG2 267 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CTSDP07339 412 aaPredicted RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 FSTP19883 344 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 DDTP30046 118 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CEACAM3P40198 252 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 FGF12P61328 243 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 RPRMLQ8N4K4 120 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CHODLQ9H9P2 273 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 ZNF586Q9NXT0 402 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 PSENENQ9NZ42 101 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 TRAV14DV4A0A0A6YYC5 116 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 FAM157AC9JC47 383 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 IL18BPO95998 194 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 NTF3P20783 257 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 MDKP21741 143 aaPredicted RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CA7P43166 264 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 GALR1P47211 349 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 SURF2Q15527 256 aaPredicted RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 ACOT6Q3I5F7 207 aaPredicted RBP9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 SIGLECL1Q8N7X8 197 aa9.09□□□□□ -0.95
CARMIL3-202ENST00000559694 CCL19Q99731 98 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms