RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 NICN1Q9BSH3 213 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 SLC23A1Q9UHI7 598 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-213ENST00000559399 DNAH9Q9NYC9 4486 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 OR5H14A6NHG9 310 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 TMEM14DPA8MWL7 114 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 RAB29O14966 203 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 SRMP19623 302 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 RAB9AP51151 201 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 INSL3P51460 131 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 GNB1P62873 340 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 NDPQ00604 133 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 ECSCRQ19T08 205 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 ASPHD1Q5U4P2 390 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 CEACAM19Q7Z692 300 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 MINDY2Q8NBR6 621 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 OR6M1Q8NGM8 313 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 KCNK15Q9H427 330 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 PLEKHJ1Q9NW61 149 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 U3KQK5 164 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
LRRC28-213ENST00000559399 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 RRHO14718 337 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 BPNT1O95861 308 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 UCHL1P09936 223 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 QRFPP83859 136 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 PLGLAQ15195 96 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 MED22Q15528 200 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 RPL39P5Q59GN2 51 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF660Q6AZW8 331 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-213ENST00000559399 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-213ENST00000559399 FBXL15Q9H469 300 aa11.6□□□□□ -0.55
LRRC28-213ENST00000559399 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-213ENST00000559399 LSM2Q9Y333 95 aaKnown RBP11.6□□□□□ -0.55
LRRC28-213ENST00000559399 A0A0A6YYD4 124 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 A0A1W2PN81 502 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 ITGB1BP1O14713 200 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 LY86O95711 162 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 CT45A6P0DMU7 189 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 CT45A5P0DMU8 189 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 CT45A7P0DMV0 189 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 MC5RP33032 325 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 CHRNA7P36544 502 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 EDARADDQ8WWZ3 215 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 UFD1Q92890 307 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 URM1Q9BTM9 101 aaKnown RBP11.59□□□□□ -0.55
LRRC28-213ENST00000559399 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
LRRC28-213ENST00000559399 LPAR5Q9H1C0 372 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 GHITMQ9H3K2 345 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 ISYNA1Q9NPH2 558 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 SCN3BQ9NY72 215 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 FBXO7Q9Y3I1 522 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
LRRC28-213ENST00000559399 TRBV6-6A0A0A6YYG2 114 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 H0YJW9 148 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 H7C2Y5 167 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 OVOL1O14753 267 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 SOX15O60248 233 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 RBBP9O75884 186 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
LRRC28-213ENST00000559399 CD37P11049 281 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 ARSBP15848 533 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 ZBTB25P24278 435 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 CRIP2P52943 208 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-213ENST00000559399 CX3CL1P78423 397 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 HLA-DRB3P79483 266 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 LIPKQ5VXJ0 399 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 GLDNQ6ZMI3 551 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-213ENST00000559399 ABHD5Q8WTS1 349 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 DCUN1D4Q92564 292 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 TMEM203Q969S6 136 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 AGMATQ9BSE5 352 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 HDHD3Q9BSH5 251 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-213ENST00000559399 ALX4Q9H161 411 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-213ENST00000559399 PLGRKTQ9HBL7 147 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 C12orf4Q9NQ89 552 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 OR1A1Q9P1Q5 309 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 MGAT4AQ9UM21 535 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 WASHC3Q9Y3C0 194 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 A3GALT2U3KPV4 340 aa11.58□□□□□ -0.56
LRRC28-213ENST00000559399 TENM3Q9P273 2699 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 SLC17A2O00624 439 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 SOCS1O15524 211 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 HSPA12AO43301 675 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 LGALS1P09382 135 aaKnown RBP11.57□□□□□ -0.56
LRRC28-213ENST00000559399 CEACAM6P40199 344 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 TMEM267Q0VDI3 215 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-213ENST00000559399 P2RY14Q15391 338 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 PYHIN1Q6K0P9 492 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 ASCL2Q99929 193 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 TOLLIPQ9H0E2 274 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 RNF150Q9ULK6 438 aa11.57□□□□□ -0.56
LRRC28-213ENST00000559399 SMAD5-AS1Q9Y6J3 95 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms