RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 Q6ZS49 121 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 AGMATQ9BSE5 352 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 MRPL20Q9BYC9 149 aaKnown RBP18.18■□□□□ 0.5
TDP1-216ENST00000556867 PIPOXQ9P0Z9 390 aa18.18■□□□□ 0.5
TDP1-216ENST00000556867 ELF5Q9UKW6 265 aaPredicted RBP18.18■□□□□ 0.5
TDP1-216ENST00000556867 SH2D7A6NKC9 451 aaPredicted RBP18.17■□□□□ 0.5
TDP1-216ENST00000556867 RAB29O14966 203 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 PEX14O75381 377 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 DTYMKP23919 212 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 TALDO1P37837 337 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 RPS19P39019 145 aaKnown RBP18.17■□□□□ 0.5
TDP1-216ENST00000556867 OR3A3P47888 321 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 NABP2Q9BQ15 211 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 TOLLIPQ9H0E2 274 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 C11orf54Q9H0W9 315 aaPredicted RBP18.17■□□□□ 0.5
TDP1-216ENST00000556867 GHITMQ9H3K2 345 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 ZNF230Q9UIE0 474 aaPredicted RBP18.17■□□□□ 0.5
TDP1-216ENST00000556867 SPATA2Q9UM82 520 aa18.17■□□□□ 0.5
TDP1-216ENST00000556867 ZNF260Q3ZCT1 412 aa18.16■□□□□ 0.5
TDP1-216ENST00000556867 MAFIPQ8WZ33 124 aa18.16■□□□□ 0.5
TDP1-216ENST00000556867 ZNF251Q9BRH9 671 aa18.16■□□□□ 0.5
TDP1-216ENST00000556867 A0A0A6YYH2 397 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 A6NJ64 397 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 GSTT2P0CG29 244 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 GSTT2BP0CG30 244 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 PITPNAQ00169 270 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 PNLIPRP3Q17RR3 467 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 OR8H1Q8NGG4 311 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 PHF21AQ96BD5 680 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 S1PR3Q99500 378 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 MRPS26Q9BYN8 205 aaKnown RBP18.15■□□□□ 0.5
TDP1-216ENST00000556867 RDH8Q9NYR8 311 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 VWFP04275 2813 aa18.15■□□□□ 0.5
TDP1-216ENST00000556867 TRBV6-7A0A0A0MS04 114 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 TMEM235A6NFC5 223 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 FBXO24O75426 580 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 NCS1P62166 190 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 RPL39P5Q59GN2 51 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 IGSF11Q5DX21 431 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 C9orf152Q5JTZ5 239 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 C11orf44Q8N8P7 122 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 Q8N9W7 124 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 ABHD14BQ96IU4 210 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 PLSCR3Q9NRY6 295 aa18.14■□□□□ 0.49
TDP1-216ENST00000556867 NCBP2LA6PVI3 153 aaKnown RBP18.13■□□□□ 0.49
TDP1-216ENST00000556867 BET1O15155 118 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 C2orf68Q2NKX9 166 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 TREML4Q6UXN2 200 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 OR10J5Q8NHC4 309 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 NUDCD2Q8WVJ2 157 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 SLC25A46Q96AG3 418 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 DCSTAMPQ9H295 470 aa18.13■□□□□ 0.49
TDP1-216ENST00000556867 LIN7CQ9NUP9 197 aaKnown RBP18.13■□□□□ 0.49
TDP1-216ENST00000556867 IGKV1D-8A0A087WSZ0 117 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 GNG2P59768 71 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 VBP1P61758 197 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 ANKRD13BQ86YJ7 626 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 ABCG5Q9H222 651 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 CMYA5Q8N3K9 4069 aa18.12■□□□□ 0.49
TDP1-216ENST00000556867 TRAV18A0A075B6X5 111 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 SSX5O60225 188 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 GABARAPO95166 117 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 IGHG2P01859 326 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 CD28P10747 220 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 FAM71E2Q8N5Q1 922 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 KCTD12Q96CX2 325 aaKnown RBP18.11■□□□□ 0.49
TDP1-216ENST00000556867 RBMXL1Q96E39 390 aaKnown RBP18.11■□□□□ 0.49
TDP1-216ENST00000556867 DIABLOQ9NR28 239 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 ZNF221Q9UK13 617 aa18.11■□□□□ 0.49
TDP1-216ENST00000556867 OR5H14A6NHG9 310 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 TSPAN15O95858 294 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 CT45A6P0DMU7 189 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 CT45A5P0DMU8 189 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 CT45A7P0DMV0 189 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 GPR12P47775 334 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 ALDH3B2P48448 385 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 F2RL1P55085 397 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 UBE2NLQ5JXB2 153 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 HIST2H2BDQ6DRA6 164 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 CENPVQ7Z7K6 275 aaPredicted RBP18.1■□□□□ 0.49
TDP1-216ENST00000556867 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.1■□□□□ 0.49
TDP1-216ENST00000556867 OR5AU1Q8NGC0 362 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 ST6GALNAC5Q9BVH7 336 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 RNF150Q9ULK6 438 aa18.1■□□□□ 0.49
TDP1-216ENST00000556867 PROP1O75360 226 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 CSF1P09603 554 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 ACTBP60709 375 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 MMDQ15546 238 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 CTF1Q16619 201 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 FAM131AQ6UXB0 335 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 SLC35E3Q7Z769 313 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 H1FOOQ8IZA3 346 aaPredicted RBP18.09■□□□□ 0.49
TDP1-216ENST00000556867 OR5AN1Q8NGI8 311 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 RASL11BQ9BPW5 248 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 GINS4Q9BRT9 223 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 NAA50Q9GZZ1 169 aaKnown RBP18.09■□□□□ 0.49
TDP1-216ENST00000556867 MMP27Q9H306 513 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 AUNIPQ9H7T9 357 aa18.09■□□□□ 0.49
TDP1-216ENST00000556867 H0YJW9 148 aa18.08■□□□□ 0.48
TDP1-216ENST00000556867 TFAP2AP05549 437 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms