RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 FGFBP3Q8TAT2 258 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 NANPQ8TBE9 248 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PPP1R1CQ8WVI7 109 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 EMG1Q92979 244 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ARL11Q969Q4 196 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MRPS24Q96EL2 167 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TSSK2Q96PF2 358 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 AQP10Q96PS8 301 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GAL3ST1Q99999 423 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ABHD14AQ9BUJ0 271 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SUCNR1Q9BXA5 334 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TTTY10Q9BZA0 68 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CST11Q9H112 138 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF665Q9H7R5 613 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 CHMP1AQ9HD42 196 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MMP26Q9NRE1 261 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM38BQ9NVV0 291 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 FAM206AQ9NX38 181 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TAS2R4Q9NYW5 299 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 MYEF2Q9P2K5 600 aaKnown RBP3.28□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF391Q9UJN7 358 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 GPR132Q9UNW8 380 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 PRELID3BQ9Y3B1 194 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 RHBDD3Q9Y3P4 386 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 TIMM10BQ9Y5J6 103 aa3.28□□□□□ -1.88
ATXN3-240ENST00000556339 A0A0U1RQV5 110 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PQLC2LA1A4F0 135 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR2AT4A6NND4 320 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF878C9JN71 531 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 J3QLI3 93 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 DNASE2O00115 360 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 WNT9BO14905 357 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SYT7O43581 403 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SPRY1O43609 319 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 KDM4BO94953 1096 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SIX6O95475 246 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 RLN2P04090 185 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 IFNA4P05014 189 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 HIST1H1DP16402 221 aaKnown RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF93P35789 620 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF133P52736 654 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ERVS71-1P61550 626 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 LMO4P61968 165 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PPP1CBP62140 327 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 LCN2P80188 198 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TNFAIP6P98066 277 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PJVKQ0ZLH3 352 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ECH1Q13011 328 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PPP1R1AQ13522 171 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TAF13Q15543 124 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 C2orf68Q2NKX9 166 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ASPHD2Q6ICH7 369 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 DCXRQ7Z4W1 244 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TMED4Q7Z7H5 227 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TRAPPC6BQ86SZ2 158 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 LHFPL1Q86WI0 220 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 JAGN1Q8N5M9 183 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR4D10Q8NGI6 311 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR52H1Q8NGJ2 320 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR2AJ1Q8NGZ0 328 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR10AC1Q8NH08 325 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR8S1Q8NH09 359 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 OR4K15Q8NH41 348 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PP6455Q8WZ26 134 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SLAMF6Q96DU3 332 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 RAB3CQ96E17 227 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 CXorf58Q96LI9 332 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 C2orf50Q96LR7 162 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 AMELYQ99218 206 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TSNAXQ99598 290 aaKnown RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 SLC6A7Q99884 636 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TM2D1Q9BX74 207 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 MRPL13Q9BYD1 178 aaKnown RBP3.27□□□□□ -1.89
ATXN3-240ENST00000556339 CHST6Q9GZX3 395 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PBOV1Q9GZY1 135 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 TUBA4BQ9H853 241 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 PLEKHA2Q9HB19 425 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 C1orf123Q9NWV4 160 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 VSIG4Q9Y279 399 aa3.27□□□□□ -1.89
ATXN3-240ENST00000556339 A0A087WYN8 130 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 C5orf51A6NDU8 294 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 TMEM235A6NFC5 223 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 H7C1C5 153 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 MFNGO00587 321 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 FOXH1O75593 365 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 CST4P01036 141 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 IFNA21P01568 189 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 IGLV3-1P01715 115 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 IGHV1-46P01743 117 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 IGHV3-13P01766 116 aa3.26□□□□□ -1.89
ATXN3-240ENST00000556339 TTRP02766 147 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms