RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 FAM231CP0DMU5 169 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ADORA1P30542 326 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 PPP1CCP36873 323 aaKnown RBP1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ACTBP60709 375 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 DAD1P61803 113 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ACTG1P63261 375 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 HES1Q14469 280 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 TBC1D28Q2M2D7 210 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 RASL11AQ6T310 242 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 SCGB1D4Q6XE38 83 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 RIBC1Q8N443 379 aaPredicted RBP1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ATP6V1C2Q8NEY4 427 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 C16orf78Q8WTQ4 265 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 TMBIM1Q969X1 311 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 PPCDCQ96CD2 204 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ABHD14BQ96IU4 210 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 TRNT1Q96Q11 434 aaKnown RBP1.04□□□□□ -2.24
SCFD1-218ENST00000556256 RBP7Q96R05 134 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 OR7D2Q96RA2 312 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 BBS2Q9BXC9 721 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 TXNL4BQ9NX01 149 aaKnown RBP1.04□□□□□ -2.24
SCFD1-218ENST00000556256 EURLQ9NYK6 297 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 GLS2Q9UI32 602 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ALG5Q9Y673 324 aa1.04□□□□□ -2.24
SCFD1-218ENST00000556256 ATAD5Q96QE3 1844 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 A0A1W2PQL4 384 aaPredicted RBP1.03□□□□□ -2.24
SCFD1-218ENST00000556256 ERICH4A6NGS2 130 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 METTL15A6NJ78 407 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CCRL2O00421 344 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 OVOL1O14753 267 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 ADAP1O75689 374 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 STK16O75716 305 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CD7P09564 240 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CCL3P10147 92 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 ESDP10768 282 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 SLC25A16P16260 332 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 NPPCP23582 126 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 F8A1P23610 371 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 GRPRP30550 384 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CRATP43155 626 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CD151P48509 253 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CLDN12P56749 244 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 H2BFSP57053 126 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 SNAP25P60880 206 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 LGALS9CQ6DKI2 356 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 LCN8Q6JVE9 175 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 OR10A6Q8NH74 314 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 FNDC9Q8TBE3 224 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 Q9BRP9 147 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 TMEM208Q9BTX3 173 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 FAM206AQ9NX38 181 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 DNAJC12Q9UKB3 198 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 CFAP45Q9UL16 551 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 HHLA2Q9UM44 414 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 PUS1Q9Y606 427 aaKnown RBP eCLIP1.03□□□□□ -2.24
SCFD1-218ENST00000556256 RIMS2Q9UQ26 1411 aa1.03□□□□□ -2.24
SCFD1-218ENST00000556256 IGHV3-15A0A0B4J1V0 119 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 DAPL1A0PJW8 107 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 VPS37CA5D8V6 355 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 FABP12A6NFH5 140 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 GOLGA6L10A6NI86 522 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 H3BPC8 53 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 CACNA1GO43497 2377 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 CALUO43852 315 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 HBZP02008 142 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 ATP5G1P05496 136 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 CRYBA1P05813 215 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 GZMBP10144 247 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 IFI30P13284 250 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 CFL1P23528 166 aaKnown RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 CRYBB3P26998 211 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 ATP6V0CP27449 155 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 MIPP30301 263 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 OR10J1P30954 320 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 RPL14P50914 215 aaKnown RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 HERVK_113P63121 156 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 MGAT3Q09327 533 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 TMEM267Q0VDI3 215 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 HLA-DRB5Q30154 266 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 SDHAF4Q5VUM1 108 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 DRAM2Q6UX65 266 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 RNASE11Q8TAA1 199 aaKnown RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 TLCD1Q96CP7 247 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 MBOAT7Q96N66 472 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 TXNDC17Q9BRA2 123 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 MND1Q9BWT6 205 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 NKX6-2Q9C056 277 aaPredicted RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 EIF5A2Q9GZV4 153 aaKnown RBP1.02□□□□□ -2.25
SCFD1-218ENST00000556256 METTL9Q9H1A3 318 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 PARVAQ9NVD7 372 aa1.02□□□□□ -2.25
SCFD1-218ENST00000556256 SLC17A3O00476 420 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 COPEO14579 308 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 ZW10O43264 779 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 TRAPPC3O43617 180 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 IGKV1-16P04430 117 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CD99P14209 185 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 HIST1H1CP16403 213 aaKnown RBP1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CRHBPP24387 322 aa1.01□□□□□ -2.25
SCFD1-218ENST00000556256 CD200P41217 278 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms