RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 EIF4E3Q8N5X7 224 aaKnown RBP6.89□□□□□ -1.31
ATXN3-235ENST00000556082 DRAM1Q8N682 238 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 DMBX1Q8NFW5 382 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 OR52L2PQ8NGH6 319 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 OR52M1Q8NGK5 317 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 OR13A1Q8NGR1 328 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MRGPRDQ8TDS7 321 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 CORO2AQ92828 525 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 NINJ1Q92982 152 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ARL11Q969Q4 196 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 YPEL2Q96QA6 119 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ARV1Q9H2C2 271 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 LIN7CQ9NUP9 197 aaKnown RBP6.89□□□□□ -1.31
ATXN3-235ENST00000556082 COQ3Q9NZJ6 369 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 NDRG3Q9UGV2 375 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 JPT1Q9UK76 154 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 PPP1R3CQ9UQK1 317 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 ESPL1Q14674 2120 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MAP1BP46821 2468 aaKnown RBP6.89□□□□□ -1.31
ATXN3-235ENST00000556082 MGAQ8IWI9 3026 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
ATXN3-235ENST00000556082 POLEQ07864 2286 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 B9A039 149 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 E7EQL1 145 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 LGALS8O00214 317 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 TNFRSF13BO14836 293 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 FGF16O43320 207 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 ADAM20O43506 726 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 ATG12O94817 140 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 FSTL3O95633 263 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 CD3EP07766 207 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 PVALBP20472 110 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 APOBEC3AP31941 199 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 SNTB1Q13884 538 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF585BQ52M93 769 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 THOC7Q6I9Y2 204 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 COMMD7Q86VX2 200 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 FAM219AQ8IW50 185 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 C1orf87Q8N0U7 546 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 PRR18Q8N4B5 295 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 UBAC2Q8NBM4 344 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 ZCCHC14Q8WYQ9 949 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 C14orf79Q96F83 325 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 HSD17B10Q99714 261 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 AGMATQ9BSE5 352 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 PARP12Q9H0J9 701 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF665Q9H7R5 613 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 OR2S2Q9NQN1 319 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
ATXN3-235ENST00000556082 LSM5Q9Y4Y9 91 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 RBM7Q9Y580 266 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 HEATR1Q9H583 2144 aaKnown RBP6.88□□□□□ -1.31
ATXN3-235ENST00000556082 TLN1Q9Y490 2541 aaKnown RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 IGHV3OR15-7A0A075B7D8 119 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TRAV38-1A0A0B4J264 116 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 KBTBD11-OT1A0A1B0GTJ5 212 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 FAM90A26D6RGX4 464 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM178BH3BS89 294 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 SIGLEC5O15389 551 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 KCNAB3O43448 404 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TNFSF12O43508 249 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 HOXA5P20719 270 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 SSTR5P35346 364 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM33P57088 247 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 LOXL3P58215 753 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 ADORA2A-AS1P86434 159 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 HOXA4Q00056 320 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TLE1Q04724 770 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 CATR1Q13166 79 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 MST1LQ2TV78 715 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 MORN2Q502X0 79 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 HSD17B13Q7Z5P4 300 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 BOLLQ8N9W6 283 aaKnown RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 ZNRF1Q8ND25 227 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 OR10A7Q8NGE5 316 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 OR51H1Q8NH63 302 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 CD300LFQ8TDQ1 290 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 GPR146Q96CH1 333 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 GAFA1Q96PS6 74 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 TMEM204Q9BSN7 226 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 REG4Q9BYZ8 158 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 SLC25A31Q9H0C2 315 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 CLN8Q9UBY8 286 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 KCNS2Q9ULS6 477 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 LAMP3Q9UQV4 416 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 RCL1Q9Y2P8 373 aaKnown RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 RNF115Q9Y4L5 304 aa6.87□□□□□ -1.31
ATXN3-235ENST00000556082 RP1L1Q8IWN7 2480 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-235ENST00000556082 CADP27708 2225 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ZGRF1Q86YA3 2104 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 CFAP47Q6ZTR5 3102 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 TRGV10A0A0A0MS01 117 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 BORCS7-ASMTA0A0B4J1R7 106 aa6.86□□□□□ -1.31
ATXN3-235ENST00000556082 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-235ENST00000556082 ZNF729A6NN14 1252 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms