RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CRTAPO75718 401 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RGS11O94810 467 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 GABARAPO95166 117 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 IGHG4P01861 327 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 ARSBP15848 533 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RCC1P18754 421 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RAB6AP20340 208 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 VDAC1P21796 283 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 PSMB8P28062 276 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 SOX6P35712 828 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 DGCR2P98153 550 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 INSL4Q14641 139 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 ARL6IP1Q15041 203 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 FAM53AQ6NSI3 398 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-203ENST00000554074 FAM71F2Q6NXP2 309 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 C18orf65Q6ZTR6 163 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 OR1L1Q8NH94 360 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 UBALD1Q8TB05 177 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 MRPL30Q8TCC3 161 aaKnown RBP5.18□□□□□ -1.58
SLIRP-203ENST00000554074 MYOZ3Q8TDC0 251 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 C4orf3Q8WVX3 66 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 GALMQ96C23 342 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RAX2Q96IS3 184 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 YPEL2Q96QA6 119 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 HSPB9Q9BQS6 159 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 ABHD14AQ9BUJ0 271 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 TM2D1Q9BX74 207 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 OR51E2Q9H255 320 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 BANF2Q9H503 90 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 PLGRKTQ9HBL7 147 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 TAF9BQ9HBM6 251 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 OR2S2Q9NQN1 319 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 KCNIP1Q9NZI2 227 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 RAB22AQ9UL26 194 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 ETV7Q9Y603 341 aa5.18□□□□□ -1.58
SLIRP-203ENST00000554074 TENM3Q9P273 2699 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 A0A0A6YYH2 397 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 METTL21EPA6NDL7 271 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 A6NJ64 397 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 TMEM14DPA8MWL7 114 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF736B4DX44 427 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ITGB1BP1O14713 200 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 LDLRAD4O15165 306 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 HLA-DRB1P01911 266 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 RPLP1P05386 114 aaKnown RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 VSIG8P0DPA2 414 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 CHATP28329 748 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 HOXD3P31249 432 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 SDC2P34741 201 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 F2RL1P55085 397 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ACTBP60709 375 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 RPS27AP62979 156 aaKnown RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 QRFPP83859 136 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 RUNX1Q01196 453 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 FHL3Q13643 280 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 HMGN3Q15651 99 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 DEFB121Q5J5C9 76 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 C9orf66Q5T8R8 295 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 SFXN4Q6P4A7 337 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF880Q6PDB4 577 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF833PQ6ZTB9 187 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 MOB1BQ7L9L4 216 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ODF3L1Q8IXM7 274 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 PRR18Q8N4B5 295 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 FAM89BQ8N5H3 189 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 NPBQ8NG41 125 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 OR10V1Q8NGI7 309 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 OR5M8Q8NGP6 311 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ACOT12Q8WYK0 555 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 AP3S1Q92572 193 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 FAM3DQ96BQ1 224 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 UBE2E2Q96LR5 201 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 CMTM3Q96MX0 182 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 NEDD4LQ96PU5 975 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 CENPOQ9BU64 300 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 TMEM59Q9BXS4 323 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 GHITMQ9H3K2 345 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 RIMS4Q9H426 269 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ABRACLQ9P1F3 81 aa5.17□□□□□ -1.58
SLIRP-203ENST00000554074 ZNF107Q9UII5 783 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 AK6Q9Y3D8 172 aaKnown RBP5.17□□□□□ -1.58
SLIRP-203ENST00000554074 TRBV6-6A0A0A6YYG2 114 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 SMIM31A0A1B0GVY4 71 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 UBE2QL1A1L167 161 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 NBR2O15453 112 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 TPPPO94811 219 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 NDUFA3O95167 84 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 NAPSAO96009 420 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 NHLRC4P0CG21 123 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-203ENST00000554074 PPP1CCP36873 323 aaKnown RBP5.16□□□□□ -1.58
SLIRP-203ENST00000554074 RORCP51449 518 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 INSL3P51460 131 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 CRIP2P52943 208 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-203ENST00000554074 CD69Q07108 199 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 KIAA0141Q14154 515 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-203ENST00000554074 GNMTQ14749 295 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 P2RY14Q15391 338 aa5.16□□□□□ -1.58
SLIRP-203ENST00000554074 MMDQ15546 238 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms