RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 OMGP23515 440 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 MPZP25189 248 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 PAX6P26367 422 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 CALRP27797 417 aaKnown RBP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 GLIPR1P48060 266 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 BMXP51813 675 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 ERVK11-1P61568 191 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 RPS11P62280 158 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 PAX2Q02962 417 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 EMX1Q04741 257 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 GPR50Q13585 617 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 GPR176Q14439 515 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 P2RY14Q15391 338 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 TRAM1Q15629 374 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 NEDD8Q15843 81 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 LY6EQ16553 131 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 TAF9Q16594 264 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 SPIN3Q5JUX0 258 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 HES5Q5TA89 166 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF565Q8N9K5 539 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 SUMF2Q8NBJ7 301 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 OR4D6Q8NGJ1 314 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 RFESDQ8TAC1 157 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 UBALD1Q8TB05 177 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 UPRTQ96BW1 309 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 PGLYRP3Q96LB9 341 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 DERL3Q96Q80 235 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 C19orf24Q9BVV8 132 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 SIRPDQ9H106 197 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 METTL8Q9H825 291 aaKnown RBP3.79□□□□□ -1.8
ATXN3-222ENST00000553570 HES4Q9HCC6 221 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF222Q9UK12 451 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 FOXJ3Q9UPW0 622 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 PEX16Q9Y5Y5 336 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 KPTNQ9Y664 436 aa3.79□□□□□ -1.8
ATXN3-222ENST00000553570 TET2Q6N021 2002 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 A0A075B6Q4 140 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 A0A0U1RQK1 487 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RNASEK-C17orf49H0YIS7 233 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 M0R1W7 72 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 SLC33A1O00400 549 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PDCD5O14737 125 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PIN1P1O15428 100 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF780AO75290 641 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ARL6IP5O75915 188 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 MGMTP16455 207 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 IGFBP3P17936 291 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PRTN3P24158 256 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 MYL9P24844 172 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 HTR2CP28335 458 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 GLP1RP43220 463 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 OR3A1P47881 315 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RAB13P51153 203 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PRRX1P54821 245 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 CLDN12P56749 244 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RPL24P83731 157 aaKnown RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 FABP5Q01469 135 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 BDH1Q02338 343 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 MXD1Q05195 221 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ACSM1Q08AH1 577 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 MLLT11Q13015 90 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 TPBGQ13641 420 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF273Q14593 569 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF146Q15072 292 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RAB11BQ15907 218 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 SSX2Q16385 188 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RNLSQ5VYX0 342 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 NCR3LG1Q68D85 454 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 C22orf42Q6IC83 251 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 OR10K2Q6IF99 312 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 Q6P435 159 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 C17orf107Q6ZR85 190 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PHC2Q8IXK0 858 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 Q8N7P7 452 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 C3orf56Q8N813 242 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 CHST4Q8NCG5 386 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 PXT1Q8NFP0 134 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 OR13D1Q8NGV5 346 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 OR4K15Q8NH41 348 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 NDNFQ8TB73 568 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 THRSPQ92748 146 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATXN3-222ENST00000553570 ZNF714Q96N38 554 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
ATXN3-222ENST00000553570 SSX3Q99909 188 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms