RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 A0A075B6Q4 140 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 ARL6IP5O75915 188 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 CT45A6P0DMU7 189 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 CT45A5P0DMU8 189 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 CT45A7P0DMV0 189 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 THBS3P49746 956 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 SPARTQ8N0X7 666 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 C5orf30Q96GV9 206 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 RAX2Q96IS3 184 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 C11orf54Q9H0W9 315 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-206ENST00000553529 KLK15Q9H2R5 256 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 RNF167Q9H6Y7 350 aa14.27□□□□□ -0.13
SHMT2-206ENST00000553529 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-206ENST00000553529 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 K7EIL1 84 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 AP4M1O00189 453 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 ATP6V0E1O15342 81 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 TXNL1O43396 289 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 DENRO43583 198 aaKnown RBP14.26□□□□□ -0.13
SHMT2-206ENST00000553529 GNB3P16520 340 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 HSPA13P48723 471 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 TRAM1Q15629 374 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 TMEM30BQ3MIR4 351 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 AGMATQ9BSE5 352 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 URM1Q9BTM9 101 aaKnown RBP14.26□□□□□ -0.13
SHMT2-206ENST00000553529 NECAP2Q9NVZ3 263 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 ABRACLQ9P1F3 81 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 STEAP1Q9UHE8 339 aa14.26□□□□□ -0.13
SHMT2-206ENST00000553529 IGKV1D-8A0A087WSZ0 117 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 IGHV7-81A0A0B4J1V7 117 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 FCN1O00602 326 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 PSMA1P25786 263 aaKnown RBP14.25□□□□□ -0.13
SHMT2-206ENST00000553529 SOX6P35712 828 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 CEACAM6P40199 344 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 IGSF11Q5DX21 431 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 STEAP3Q658P3 488 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 CD200R1LQ6Q8B3 271 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 ZNF554Q86TJ5 538 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 KCTD7Q96MP8 289 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 CMSS1Q9BQ75 279 aaKnown RBP14.25□□□□□ -0.13
SHMT2-206ENST00000553529 FBXL15Q9H469 300 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 RAB9BQ9NP90 201 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 GAB2Q9UQC2 676 aa14.25□□□□□ -0.13
SHMT2-206ENST00000553529 TRBV6-6A0A0A6YYG2 114 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 PSMB9P28065 219 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 RAB25P57735 213 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 SLC35B1P78383 322 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 OR5B12Q96R08 314 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 P2RX4Q99571 388 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 GNB4Q9HAV0 340 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 C12orf4Q9NQ89 552 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 TPSG1Q9NRR2 321 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
SHMT2-206ENST00000553529 TRDV1A0A1B0GX56 115 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 IFITM5A6NNB3 132 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 H0YJW9 148 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 NBR2O15453 112 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 CLEC2LP0C7M8 214 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 GSTT2P0CG29 244 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 GSTT2BP0CG30 244 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 GABARAPL2P60520 117 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 PNLIPRP3Q17RR3 467 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 UBE2UQ5VVX9 321 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 ZNF695Q8IW36 515 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 ZNF383Q8NA42 475 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 ALX4Q9H161 411 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-206ENST00000553529 OR51E2Q9H255 320 aa14.23□□□□□ -0.13
SHMT2-206ENST00000553529 RAB27BO00194 218 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 MFNGO00587 321 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 SOX15O60248 233 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 RGS11O94810 467 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 FCGR3AP08637 254 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 LUMP51884 338 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-206ENST00000553529 KIAA0141Q14154 515 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-206ENST00000553529 C5orf64Q2M2E5 130 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 LY6G6FQ5SQ64 297 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 TEX38Q6PEX7 206 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 MOB1BQ7L9L4 216 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
SHMT2-206ENST00000553529 TXNL4BQ9NX01 149 aaKnown RBP14.22□□□□□ -0.13
SHMT2-206ENST00000553529 RDH8Q9NYR8 311 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 BLOC1S6Q9UL45 172 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 A3GALT2U3KPV4 340 aa14.22□□□□□ -0.13
SHMT2-206ENST00000553529 TRAV1-2A0A0B4J238 106 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 BET1O15155 118 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 HSPA12AO43301 675 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 IGKV1-16P04430 117 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 RAB3BP20337 219 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 VDAC1P21796 283 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 PPIFP30405 207 aaKnown RBP14.21□□□□□ -0.13
SHMT2-206ENST00000553529 TGFBR1P36897 503 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 ECSCRQ19T08 205 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 ASPHD1Q5U4P2 390 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 OR8H1Q8NGG4 311 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 OR56B1Q8NGI3 324 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 OR10R2Q8NGX6 335 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 RAB3CQ96E17 227 aa14.21□□□□□ -0.13
SHMT2-206ENST00000553529 OR51J1Q9H342 316 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms