RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 IL22RA2Q969J5 263 aa16.13■□□□□ 0.17
RBFOX1-215ENST00000553186 SDHAF2Q9NX18 166 aa16.13■□□□□ 0.17
RBFOX1-215ENST00000553186 KLF2Q9Y5W3 355 aaPredicted RBP16.13■□□□□ 0.17
RBFOX1-215ENST00000553186 UBR5O95071 2799 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 SNAPC5O75971 98 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 RPA2P15927 270 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 NDUFA5Q16718 116 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 FAM219AQ8IW50 185 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 HEXA-AS1Q9H8Q6 139 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 IDI2-AS1Q9NZ38 188 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 MBD2Q9UBB5 411 aa16.12■□□□□ 0.17
RBFOX1-215ENST00000553186 ITGB1BP1O14713 200 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 PROP1O75360 226 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 IGHV3-7P01780 117 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 S100A1P23297 94 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 SRSF1Q07955 248 aaKnown RBP eCLIP16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 RAB32Q13637 225 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 ZNF585BQ52M93 769 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 AVPI1Q5T686 147 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 ZNF841Q6ZN19 808 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 SLA2Q9H6Q3 261 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 TNFSF18Q9UNG2 199 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 DUXBA0A1W2PPF3 345 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 GOSR1O95249 250 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 CDKN1AP38936 164 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 RPL30P62888 115 aaKnown RBP16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 OR52M1Q8NGK5 317 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 THAP6Q8TBB0 222 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 H1FXQ92522 213 aaKnown RBP16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 LEAP2Q969E1 77 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 IFI27L2Q9H2X8 130 aa16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 LIN7CQ9NUP9 197 aaKnown RBP16.11■□□□□ 0.17
RBFOX1-215ENST00000553186 L7N2F9 121 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 SLC31A2O15432 143 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 SERPINE2P07093 398 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 CCL3L1P16619 93 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 TMEM30BQ3MIR4 351 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 NMSQ5H8A3 153 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 MFFQ9GZY8 342 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 PLEKHF2Q9H8W4 249 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 LPAR3Q9UBY5 353 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 RPUSD1Q9UJJ7 312 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 ARID1AO14497 2285 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 IGKV1-39P01597 117 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 IGKV1D-39P04432 117 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 LYL1P12980 280 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 VDAC1P21796 283 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 ERVFRD-1P60508 538 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 CT45A1Q5HYN5 189 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 PRAMEF5Q5TYX0 476 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 BTNL3Q6UXE8 466 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 ZNF439Q8NDP4 499 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 CT45A3Q8NHU0 189 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 ZNF714Q96N38 554 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 GAL3ST2Q9H3Q3 398 aa16.1■□□□□ 0.17
RBFOX1-215ENST00000553186 USF3Q68DE3 2245 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 RNF212BA8MTL3 300 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 NFYBP25208 207 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 BRWD1-AS2P59051 145 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 HEPN1Q6WQI6 88 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 SPOCK3Q9BQ16 436 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 CHODLQ9H9P2 273 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 OR5AC2Q9NZP5 309 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 RNF222A6NCQ9 220 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 TSC22D2O75157 780 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 NDUFS7O75251 213 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 ZNF16P17020 682 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 Q3ZCU0 254 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 PRSS54Q6PEW0 395 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 OR10A7Q8NGE5 316 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 ABHD14AQ9BUJ0 271 aa16.09■□□□□ 0.17
RBFOX1-215ENST00000553186 PPIHO43447 177 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 GPR12P47775 334 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 LINC00205P59089 165 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 OPCMLQ14982 345 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNF66Q6ZN08 573 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 TMUB2Q71RG4 321 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 RAB1CQ92928 201 aa16.08■□□□□ 0.16
RBFOX1-215ENST00000553186 CLEC18AA5D8T8 446 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 LINC00473A8K010 186 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 F12P00748 615 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 S100A11P31949 105 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 RAB7AP51149 207 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 DLX6P56179 175 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 TMEM33P57088 247 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 TMEM155Q4W5P6 130 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 CLEC18CQ8NCF0 446 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 OR4D5Q8NGN0 318 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 TIMD4Q96H15 378 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 HSD17B10Q99714 261 aaKnown RBP16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 GAB2Q9UQC2 676 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 A0A0G2JRQ6 117 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 OVOL3O00110 214 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 KCNAB3O43448 404 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 RAMP3O60896 148 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 CLDN1O95832 211 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 MBPP02686 304 aaPredicted RBP16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 S100A10P60903 97 aa16.07■□□□□ 0.16
RBFOX1-215ENST00000553186 ZNF345Q14585 488 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms